Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto5g0216 ATGGAAGGAGGTGGGGGTGATGCCCCTTCCACGGTGGCACCTCTAGCCCAGTGGAGGAATGATTTTTCTAGGGCATTTCACTACTATCTAGATCGTTCTACTCCTCACACAGGTCAGAGGTGGCTGGGAACCCTTGCTGTGGCAGCTATTTATGTCCTGAGGGTTTACTATGTTCGAGGGTTCTACGTTGTATCCTATGGCCTAGGCATATATATCTTGAATCTGTTGATCGGTTTTATGTCACCAAAAGTTGATCCAGAGCTTGAAGTCTTAGATGGGGCTTCATTGCCAACTAAGGACTCAGATGAGTTTAAACCATTTGTTCGTCGCCTTCCAGAGTTCAAGTTCTGGTATTCCATCACAAAGGCTTTCTGTGTTGCCTTCCTTATGACTTTCATATCTGTCCTTGACGTCCCGGTTTTCTGGCCCATACTTCTGTGCTATTGGTTTGTCCTGTTCATCCTCACAATGAAGCGTCAAATTATGCACATGATTAAGTACAAATATGTCCCAGTCGACATTGGAAAGAAGGAATTTCCAAAGTTCAAGGTTTTGGATGCATTTACATTTCCCGTGTTCAAGAGTTTAGACATTGGAGCATTTCTATGTTGCCAGGATATGGAGAAAAGGATGGAAGAAGGAGAGGTAGTGAAGGATAGAAGAATGATGGGTCCCTACATAGAGAACCACATCACAAAAACCTCGAATCTTATCACAAAAGCAACACCGGCCGTGACGTTGGTGGTAGCAGCAGAGGATTTGGCCCCTGCACCAGCACTAGCACCAACTGCATCTGCATCATTAGGAAGTGGAAGAGCCAACTTGACGGCGTCGTATCATATTCATAATCATACTCTTGGAAACAATAAAAGTGATGACGGAGTTACGCTAATGTCTCCCAGAGAACACTTGAAGCAAGCAAAGATCCTATCCACAACCTCCTGA 945 0.4476 MEGGGGDAPSTVAPLAQWRNDFSRAFHYYLDRSTPHTGQRWLGTLAVAAIYVLRVYYVRGFYVVSYGLGIYILNLLIGFMSPKVDPELEVLDGASLPTKDSDEFKPFVRRLPEFKFWYSITKAFCVAFLMTFISVLDVPVFWPILLCYWFVLFILTMKRQIMHMIKYKYVPVDIGKKEFPKFKVLDAFTFPVFKSLDIGAFLCCQDMEKRMEEGEVVKDRRMMGPYIENHITKTSNLITKATPAVTLVVAAEDLAPAPALAPTASASLGSGRANLTASYHIHNHTLGNNKSDDGVTLMSPREHLKQAKILSTTS 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto5g0216 314 PANTHER PROTEIN RER1 1 179 IPR004932 GO:0016021
Sto5g0216 314 Pfam Rer1 family 18 179 IPR004932 GO:0016021
Sto5g0216 314 PANTHER PROTEIN RER1D 1 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto5g0216 Sto-Chr5 1291317 1294598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto5g0216 1 179 Miscellaneous Gene Families AT2G21600 68.156 2.32e-93 273
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto5g0216 - - nnu:104601834 318.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto5g0216 5 1291317 1294598 Sto11g1536 11 14547332 14548006 ECH
Sto5g0216 5 1291317 1294598 Sto5g0216 5 1291317 1294598 ECH