Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto11g1522 ATGTCTGGAACTATGTCTCCCAAGTCAGCTCTTGAAAGACCTGATGGCACCGGATCTTTTAAGAGGAGAGCTTCAAATAAGTTCAGGAATTCTTTATCAAGAAAAGGTAGGAGATCTAGCAAGGTTATGTCAGTTGAAATTGAGGATATTCGTGATGCTGAGGAATCAGAAGCTGTTGAGGCATTCCGGCAAGTTCTTGTATCGGAAGACCTACTCCCTGCTAAACACGATGATTATCATATGCTTCTCAGATTCCTAAAGGCCAGGAAATTCGAAACGGATAAAACAAAGCAAATGTGGTCTGACATGCTCCAGTGGAGAAAGGAATTTGGTGCTGACACAATTATGGAGGATTTTGAGTTCAAGGAACAAAGTGAAGTCTTACAATATTATCCCCAAGGGCATCATGGAGTAGATAAAGATGGACGACCTGTGTACATTGAGAGATTGGGCCTAGTAGACTCAAACAAGCTTATGCAAGTAACAACCTTAGAACGCTATATCAAGTACCATGTACGGGAATTTGAGAGGACATTTGATATAAAGTTTCCGGCGTGTTCAATTGCTGCAAAGAAGCACATTGATCAAAGTACAACCATCCTAGATGTGCAAGGAGTGGGGCTTAAGCAATTCAGCAAATCGGCTAGGGAACTTGTTACTCGCCTTCAGAAGATTGACGGTGACAATTATCCAGAGAGCTTGAATCGCATGTTCATCATCAATGCTGGTTCTGGGTTCAGAATGTTATGGAGCACTGTGAAATCCTTCCTTGATCCTAAGACCACAGCTAAAATTAACGTTTTGGGCAACAAGTACCAGAGCAAATTGCTTGAAATAATTGATGCAACTGAATTGCCAGAGTTTTTAGGAGGTACTTGTACCTGTGCTGATCAAGGAGGCTGTATGCTTTCCGATAAGGGCCCATGGAAGAATGAAGAAATATTGAGGAAGGTTCAGAATGGTGATCATAAATGTTCAAGAAAAACTGAGTCTCAAGTGGTGGAGGAGAAGACAGCTTCTGAGGCCCTGCCGACCAGCAACCACATCAGTCAGAGTCCACCAGCTCCTGTTAGTGCTGAGGTCTCTGCTACCATAGCTTGCAAATCTGAGGACTTGGCCCCAGTGGCTGAAAATATTCCAGTGGCTGAAAAAGTTTCAGTGGCTGAAATAGCTCCAGTGGCTGAAAAAGCCCCATTGACCGATATAATCCCAGTAGCTGAAACTGGAATAGATACTTTCATCAGTATGGCTGATACGTACAAGCTCCACGAGAAATTAAACTACCAGCTTTTCACTGGTGTCATGGCCTTTGTTATGGGTATCGTGACCATGGTTAGAATGACACGAAACATGCCGAAGCAGCTCACCGATGCCAACTTCTACTCCAATCCCACTTACTCTTCTGATCCAATGTATATGGGGAAGGCTGCTGCCCCTCCTGATGAGGAGGACCCTATGCCTACCATTTCTGCTGAAGAGTTTATGACCGTCCTAAAACGCATGACTGAGTTGGAAGAGAAAATGGTCACCATGAATATACCTGCTTACATGCCTCCTGAGAAGGAGGAAATGCTCATTGCTGCATTGAACCGAGCTGATGTATTGGAGAAAGAACTTATGGCTACCAAGAAGGCTTTGGAGGATTCACTTGCCCAACAAGAGGAGCTTTTAGCTTATATtgacaaaaagaagaagaagaaatcttGGTTTTGA 1713 0.4308 MSGTMSPKSALERPDGTGSFKRRASNKFRNSLSRKGRRSSKVMSVEIEDIRDAEESEAVEAFRQVLVSEDLLPAKHDDYHMLLRFLKARKFETDKTKQMWSDMLQWRKEFGADTIMEDFEFKEQSEVLQYYPQGHHGVDKDGRPVYIERLGLVDSNKLMQVTTLERYIKYHVREFERTFDIKFPACSIAAKKHIDQSTTILDVQGVGLKQFSKSARELVTRLQKIDGDNYPESLNRMFIINAGSGFRMLWSTVKSFLDPKTTAKINVLGNKYQSKLLEIIDATELPEFLGGTCTCADQGGCMLSDKGPWKNEEILRKVQNGDHKCSRKTESQVVEEKTASEALPTSNHISQSPPAPVSAEVSATIACKSEDLAPVAENIPVAEKVSVAEIAPVAEKAPLTDIIPVAETGIDTFISMADTYKLHEKLNYQLFTGVMAFVMGIVTMVRMTRNMPKQLTDANFYSNPTYSSDPMYMGKAAAPPDEEDPMPTISAEEFMTVLKRMTELEEKMVTMNIPAYMPPEKEEMLIAALNRADVLEKELMATKKALEDSLAQQEELLAYIDKKKKKKSWF 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto11g1522 570 Pfam CRAL/TRIO domain 129 291 IPR001251 -
Sto11g1522 570 SUPERFAMILY CRAL/TRIO domain 125 316 IPR036865 -
Sto11g1522 570 CDD SEC14 122 292 IPR001251 -
Sto11g1522 570 MobiDBLite consensus disorder prediction 1 37 - -
Sto11g1522 570 Gene3D - 111 323 IPR036865 -
Sto11g1522 570 SMART CRAL_TRIO_N_2 78 103 IPR011074 -
Sto11g1522 570 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 16 568 - -
Sto11g1522 570 Coils Coil 532 556 - -
Sto11g1522 570 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH10-RELATED 16 568 - -
Sto11g1522 570 Pfam CRAL/TRIO, N-terminal domain 75 102 IPR011074 -
Sto11g1522 570 SMART sec14_4 123 294 IPR001251 -
Sto11g1522 570 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 123 297 IPR001251 -
Sto11g1522 570 SUPERFAMILY CRAL/TRIO N-terminal domain 52 119 IPR036273 -
Sto11g1522 570 Gene3D - 32 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto11g1522 Sto-Chr11 14424968 14429250 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto11g1522 57 288 Acyl Lipid Metabolism Gene Families AT5G47730 28.862 2.73e-21 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto11g1522 - - lang:109350159 754.977
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto11g1522 11 14424968 14429250 Sto11g1522 11 14424968 14429250 ECH
Sto2g0745 2 6376823 6385380 Sto11g1522 11 14424968 14429250 ECH
Sto10g0150 10 1197021 1201522 Sto11g1522 11 14424968 14429250 ECH