Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto2g0745 ATGAGTGATCATAATACTACTATGTCTGTACCTGGTGATCGATCCCTTAAAGCTCTTCTTGAAATGGATTATATTGAggatgaaaagaagaaaagggtTGGATCTTTAAAGAAAAAAGCATTGAGTGCCTCATCCAAGTTCAGGAATTCCCTGACAAAGAGAACTCGGAAGAGCAACAAGGTTATGTCGATCGGTTACGAGGACGAACTCGACACTGAAGAGTTGCAGGCGGTCGATGCTTTTCGCCAAGCACTTATCTTGGAGGAGTTGTTGCCTGCAAAACATGATGATCATCATATGATGCTAAGATTCTTGAGAGCAAgaaagtatgaaattgagaaaACCAAGCAAATGTGGGCAGACATGCTTCAGTGGAGAAAGGAATTTGGTGCTGACACCATCATGGAGgacTTTGAATTCAAAGAAATAGATGAAGTTTTAAAACACTACCCACAAGGGCATCACGGAGTTGACAAAGACGGCCAACCCGTGTACATCGAAAGGTTGGGTCAGGTCGATCCGAACAAGTTGTTGCAAGCAACAACTTTGGACCGTTATGTGAAGTATCATGTCAAAGAGTTCGAGAGGACTTTTGCTGTCAAGTTCCCTGCTTGTTCAATTGCAGCAAAGAAGCACATTGATCAGAGCACAACTATTCTAGATGTGCAAGGAGTGggactaaaaaattTCAACAGACAAGCAAGAGAACTCATCCAACGCCTTCAGAAGATTGATGGTGAAAACTATCCTGAGACACTAAACCGGATGTTCATCATCAATGCCGGTTCCGGATTCAGGCTCTTGTGGAACACTATTAAGTCATTCCTCGATCCCAAGACAACTGCAAAAATCCATGTTCTAGGTAACAAATACCAGAGCAAGTTGCTTGAAATCATTGATGCCAGtGAGCTTCCAGAGTTCTTGGGTGGTACTTGTACTTGTGCAGATAAAGGTGGTTGTATGGTTTCTGACAAAGGACCATGGAATGACCCAGAAATCTTGAGGATGGTTCAAAATGGTGGGGCCACATGCAGGAGGAAACCCTTAATAAAGATTCATGAGAAAACAATCTCTGAAGATGAGACATCATATCAAAAGGGAAGCAATTCTTCCTCAAAAGTTGAGAGTCCTAGTCTCTCTCCTCCTCCAGAAGGATTTGTGAAGCCAACTACCATGCATCCATATGACATCGTTGACAAGCCGGGAAATGCAACTTGGACAAAAGCCGAACAAAACGAAAAATTAGTACTCTCGAAAGCTGCATACAACAATGTCTGCAAGATTGCTGTTGTGTACAACAATCATGTAGTTGGAGGGATCATGGCTCTTTTGATGGGAATTTTAACTGTGGTAAGAATGACAAGGCACATTCCAAGGAAGCTCACTGAAGCTGCCATCTATGGCTGCTCTGTGCAATATGAGAGCACAAGAGTGAAGGCTCCCagcatttccatttccattgaTGATCACATGGCCTTGATGAAGCGGATGGCTGAGCTAGAAGATAAAGTTAGTGTTCTCACCATGAAACCTCCTCAGCCTTCCATGCcaaaagagaaggaagaaatTCTGAATGCCACTCTAAGCAGAGTCATTGATCTTGAGCAACAGTTAGCTGCATCCAAAAAGGCTCTTGATGATGCCATTGTTAAACAAGAGGAACTCCAAGCCTGcattgaaaagaagaagaagaaaaagaagtttGGCCCTACCTTTTTTGTGGCAATTAACTCTGCTTCCAAAGCATCTACCCGGCAGACCGCAGCATTCAACAATTCCTCTTTCTCAGAAGGCATCGCAGATGGCTTTGATTGGAGAGTTTCCACCTTCTCTTCAAGCTCACCTAACCGTTTTAGCATAGAGGGAAGGAGATCCGCCTGTGTTTTTACAGGAACTGGAAGTCTCTTGGTCACACGGCAAGCAATTGAACGGAAAAGAGTAAATAGGGTCAAGAAGAAGACAGTCAGGGCTACCCAAATCCGAGCTCGAATCCCTTCTGGAGTTTTCTCAGTGTCAGGAAGGGGAGGTGTTCCTGTATTCGAAGAAGATTAA 2052 0.4142 MSDHNTTMSVPGDRSLKALLEMDYIEDEKKKRVGSLKKKALSASSKFRNSLTKRTRKSNKVMSIGYEDELDTEELQAVDAFRQALILEELLPAKHDDHHMMLRFLRARKYEIEKTKQMWADMLQWRKEFGADTIMEDFEFKEIDEVLKHYPQGHHGVDKDGQPVYIERLGQVDPNKLLQATTLDRYVKYHVKEFERTFAVKFPACSIAAKKHIDQSTTILDVQGVGLKNFNRQARELIQRLQKIDGENYPETLNRMFIINAGSGFRLLWNTIKSFLDPKTTAKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADKGGCMVSDKGPWNDPEILRMVQNGGATCRRKPLIKIHEKTISEDETSYQKGSNSSSKVESPSLSPPPEGFVKPTTMHPYDIVDKPGNATWTKAEQNEKLVLSKAAYNNVCKIAVVYNNHVVGGIMALLMGILTVVRMTRHIPRKLTEAAIYGCSVQYESTRVKAPSISISIDDHMALMKRMAELEDKVSVLTMKPPQPSMPKEKEEILNATLSRVIDLEQQLAASKKALDDAIVKQEELQACIEKKKKKKKFGPTFFVAINSASKASTRQTAAFNNSSFSEGIADGFDWRVSTFSSSSPNRFSIEGRRSACVFTGTGSLLVTRQAIERKRVNRVKKKTVRATQIRARIPSGVFSVSGRGGVPVFEED 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto2g0745 683 Pfam CRAL/TRIO domain 148 310 IPR001251 -
Sto2g0745 683 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 142 316 IPR001251 -
Sto2g0745 683 SMART sec14_4 142 313 IPR001251 -
Sto2g0745 683 CDD SEC14 143 311 IPR001251 -
Sto2g0745 683 PRINTS Cellular retinaldehyde-binding protein signature 100 122 - -
Sto2g0745 683 PRINTS Cellular retinaldehyde-binding protein signature 269 288 - -
Sto2g0745 683 PRINTS Cellular retinaldehyde-binding protein signature 302 311 - -
Sto2g0745 683 SUPERFAMILY CRAL/TRIO domain 142 337 IPR036865 -
Sto2g0745 683 Gene3D - 130 341 IPR036865 -
Sto2g0745 683 Coils Coil 227 247 - -
Sto2g0745 683 MobiDBLite consensus disorder prediction 362 378 - -
Sto2g0745 683 Gene3D - 33 129 - -
Sto2g0745 683 MobiDBLite consensus disorder prediction 358 383 - -
Sto2g0745 683 Pfam CRAL/TRIO, N-terminal domain 88 121 IPR011074 -
Sto2g0745 683 SUPERFAMILY CRAL/TRIO N-terminal domain 64 138 IPR036273 -
Sto2g0745 683 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 12 569 - -
Sto2g0745 683 SMART CRAL_TRIO_N_2 97 122 IPR011074 -
Sto2g0745 683 PANTHER SEC14P-LIKE PHOSPHATIDYLINOSITOL TRANSFER FAMILY PROTEIN 12 569 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto2g0745 Sto-Chr2 6376823 6385380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto2g0745 76 307 Acyl Lipid Metabolism Gene Families AT5G47730 27.386 4.33e-19 87.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto2g0745 - - gmx:100798374 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto2g0745 2 6376823 6385380 Sto2g0745 2 6376823 6385380 ECH
Sto2g0745 2 6376823 6385380 Sto11g1522 11 14424968 14429250 ECH