Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sto10g0150 ATGTCCGGCCCGCTGGATCGTTTCGCTAGACCTTGCTTTGAGGGATTCTCTGGAAGTGATGAGAGAAGGGAAAGGAGATCTGATTTTGAGAACTCTGAGGATGAAAGACGGACAAGAATTGGCTCTCTCAAAAAGAAAGCAATCAATGCATCTACCAAATTCAAACATTCTCTAAAGAAAAAAAGTGGCAGGAGAAAGAAAGATGGCCGGGTTAGTTCAGTTTCCATTGAAGACATTCGAGATGTAGAGGAACTGCAGGCTGTTGATGCATTTCGGCAATCATTGATTATGGATGAATTGCTTCCAGGAAAACACGATGACTACCATATGATGTTAAGATTCCTGAAAGCAAGGAAGTTTGATATTGAAAGAGCAAAGCATATGTGGGCTGATATGCTAAAGTGGAGGAAGGATTTTGGTGCTGACACTATTATGGAGGATTTTGAGTTCAAGGAGTATAATGATGTTGTGATGTATTACCCTCATGGCCATCATGGTGTTGATAAGGAGGGAAGACCAGTTTACATTGAAAGACTTGGAAAGGTTGATCCAAACAAACTTATGCAAGTTACAACTTTGGATAGATATGTTAAGTACCATGTGCAAGAATTTGAAAAGGCTTTTGCAATAAAGTTCCCGGCTTGCACCATTGCTGCCAAGAGGCACATAGATTCAAGCACCACAATCTTAGACGTTCAAGGCGTTGGCTTGAAAAACTTTACAAAGTCTGCCCGGGATCTCATTACACGATTGCAGAAGATTGATGGAGACAATTATCCTGAGACTCTCTGCCAAATGTTTATCATAAATGCTGGCCCTGGATTTAGGCTACTGTGGAATACTGTCAAGACTTTTATTGATCCCAAAACAACTTCAAAGATACATGTTCTTGGAAACAAGTACCAGAGCAAGTTGCTTGAAATAATTGATGCCAGTGAGTTGCCAGAATTTCTGGGAGGGACCTGCACTTGTGCAGATCAGGGAGGTTGCCTCATATCTGATAAAGGGCCTTGGAAAAACCCTGAAATATTGAAGATGGTTCTCAGGGGTGAAGCACGGGGGGCAAGGCAGGTAGTAAAAGTATTAAATAGCGAAGGGAAGGTTATTGCATACGCCAAACCTCGTTACCCAGTGGTAAAAGGCAGTGATACATCCACTGCTGAATCAGGGTCTGAAGCAGACTCTCCTAAAGCAATGAAGAGCTACTCACATCTTAGGTTGACCCCTGTTCGTGAGGAAGCTAAGGTGGTTGGAAAGACGAACTATGTTGGTAGCTTATCGAGGTATGATGAATACGTTCCAGTAGTGGACAAAACTGTTGATGCGAGCTGGAAGATGCAAGCAGCTCTTCAGAGGCCTAGTACTTCTAAAGTTGAATTTTCAAATTCAGGAACACCTCCCCTTACTGACACTCAGAAAACTCCAGAAGGGATGCGAGCTCAGATTTGGGCAGCCCTGACTGTCTTCTTCTTAACCCTTTTCACTCTCTTCCATTCAATTGCATGTCGCGTGACCAAGAAACTTCCTGCAACGTTATCTAATGATAGTCAGAGTACTTCAGAACCAAATCTTGAAACAACAAACAATGACTGTCATCTTCCTTCACCAAGTTCAGCATATACAGAGGAAGATCAACTTTCCTTTATGCTAAAGAAGTTGGGCGAGCTTGAAGAGAAGGTTAACACACTCCAATCTAAGCCGTCTGAGATGCCTTGTGAGAAAGACGAATTGTTGAATGCAGCTGTCTGCCGAGTGGATGCTTTGGAAGCAGAGTTGATTACTACTAAAAAGGCTCTCTATGAAGCATTAATGAGGCAAGAGGAACTGCTTGCCTACATTGATAGTCAAGCAGCAGCGAAGTTACGGAAAAAGAAGTTTTGCTGGTGA 1887 0.4266 MSGPLDRFARPCFEGFSGSDERRERRSDFENSEDERRTRIGSLKKKAINASTKFKHSLKKKSGRRKKDGRVSSVSIEDIRDVEELQAVDAFRQSLIMDELLPGKHDDYHMMLRFLKARKFDIERAKHMWADMLKWRKDFGADTIMEDFEFKEYNDVVMYYPHGHHGVDKEGRPVYIERLGKVDPNKLMQVTTLDRYVKYHVQEFEKAFAIKFPACTIAAKRHIDSSTTILDVQGVGLKNFTKSARDLITRLQKIDGDNYPETLCQMFIINAGPGFRLLWNTVKTFIDPKTTSKIHVLGNKYQSKLLEIIDASELPEFLGGTCTCADQGGCLISDKGPWKNPEILKMVLRGEARGARQVVKVLNSEGKVIAYAKPRYPVVKGSDTSTAESGSEADSPKAMKSYSHLRLTPVREEAKVVGKTNYVGSLSRYDEYVPVVDKTVDASWKMQAALQRPSTSKVEFSNSGTPPLTDTQKTPEGMRAQIWAALTVFFLTLFTLFHSIACRVTKKLPATLSNDSQSTSEPNLETTNNDCHLPSPSSAYTEEDQLSFMLKKLGELEEKVNTLQSKPSEMPCEKDELLNAAVCRVDALEAELITTKKALYEALMRQEELLAYIDSQAAAKLRKKKFCW 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sto10g0150 628 MobiDBLite consensus disorder prediction 16 42 - -
Sto10g0150 628 Pfam CRAL/TRIO domain 159 320 IPR001251 -
Sto10g0150 628 SUPERFAMILY CRAL/TRIO N-terminal domain 82 148 IPR036273 -
Sto10g0150 628 MobiDBLite consensus disorder prediction 1 42 - -
Sto10g0150 628 MobiDBLite consensus disorder prediction 455 474 - -
Sto10g0150 628 SUPERFAMILY CRAL/TRIO domain 155 346 IPR036865 -
Sto10g0150 628 Gene3D - 76 139 - -
Sto10g0150 628 CDD SEC14 153 321 IPR001251 -
Sto10g0150 628 SMART CRAL_TRIO_N_2 107 132 IPR011074 -
Sto10g0150 628 PANTHER PHOSPHATIDYLINOSITOL/PHOSPHATIDYLCHOLINE TRANSFER PROTEIN SFH8 3 625 - -
Sto10g0150 628 Coils Coil 546 566 - -
Sto10g0150 628 Pfam CRAL/TRIO, N-terminal domain 105 131 IPR011074 -
Sto10g0150 628 PRINTS Cellular retinaldehyde-binding protein signature 110 132 - -
Sto10g0150 628 PRINTS Cellular retinaldehyde-binding protein signature 279 298 - -
Sto10g0150 628 PRINTS Cellular retinaldehyde-binding protein signature 312 321 - -
Sto10g0150 628 SMART sec14_4 152 323 IPR001251 -
Sto10g0150 628 ProSiteProfiles CRAL-TRIO lipid binding domain profile. 152 326 IPR001251 -
Sto10g0150 628 Gene3D - 140 351 IPR036865 -
Sto10g0150 628 PANTHER CRAL-TRIO DOMAIN-CONTAINING PROTEIN YKL091C-RELATED 3 625 - -
Sto10g0150 628 MobiDBLite consensus disorder prediction 512 536 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sto10g0150 Sto-Chr10 1197021 1201522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sto10g0150 86 317 Acyl Lipid Metabolism Gene Families AT5G47730 29.218 5.70e-22 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sto10g0150 - - gmx:100785793 1011.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Sto10g0150 10 1197021 1201522 Sto10g0150 10 1197021 1201522 ECH
Sto10g0150 10 1197021 1201522 Sto11g1522 11 14424968 14429250 ECH