Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1440 ATGTCGCTGCTCTCAGATCTCATCAACCTTAACCTCTCCGAGACCACCGAGAAGGTGATCGCGGAGTACATATGGATCGGTGGATCAGGAATGGACCTAAGGAGCAAAGCAAGGACTCTCCCAGGACCAGTTAGCGACCCTTCAAAGCTGCCCAAGTGGAATTATGATGGTTCCAGCACAGGTCAAGCTCCTGGAGAGGACAGCGAAGTGATTTTAtaCCCACAAGCCATTTTCAGGGATCCATTCAGAAGGGGTAACAATATCTTGGTTATCTGTGATGCTTACACTCCTGCTGGAGAACCCATTCCCACTAACAAGAGGCACAATGCTGCCAAGATATTCTGCCATCCTGATGTTGTTGCTGAAGAGACCTGGTATGGTATTGAGCAGGAATACACCTTGTTGCAGAAAGATGTCCACTGGCCTCTTGGGTGGCCTGTTGGTGGTTTCCCTGGACCTCAGGGGCCATACTATTGTGGTGCGGGTGCTGATAAGGCTTTTGGCCGTGACATTGTTGACGCGCATTACAAAGCCTGTCTTTATGCCGGCGTTAACATCAGTGGAATTAACGGAGAAGTGATGCCCGGTCAGTGGGAATTCCAAGTTGGCCCTGCAGTTGGTATCTCAGCTGGTGACGAGTTGTGGGTAGCTCGTTACATCTTGGAGAGGATCACCGAGATTGCTGGTGTGGTGCTTTCCTTTGACCCCAAGCCAATTCAGGGTGATTGGAATGGTGCCGGTGCTCACACAAACTACAGCACCAAGTCCATGAGAAATGATGGTGGCTATGAGGTGATCAAAGCTGCTATTGAGAAATTGGGAAAGAGGCACAAGGAGCACATTGCTGCTTATGGAGAAGGCAACGAGCGTCGTTTGACAGGACGACACGAAACAGCTGACATCAACACCTTCTTATGGGGAGTTGCAAACCGTGGAGCTTCTATTAGAGTTGGGAGGGACACAGAGAAAGCAGGGAAGGGATATTTTGAGGACAGGAGACCTGCTTCTAACATGGACCCATATGTGGTTACTTCCATGATTGCAGAAACAACCATTCTCTGGAAACCATGA 1071 0.4949 MSLLSDLINLNLSETTEKVIAEYIWIGGSGMDLRSKARTLPGPVSDPSKLPKWNYDGSSTGQAPGEDSEVILYPQAIFRDPFRRGNNILVICDAYTPAGEPIPTNKRHNAAKIFCHPDVVAEETWYGIEQEYTLLQKDVHWPLGWPVGGFPGPQGPYYCGAGADKAFGRDIVDAHYKACLYAGVNISGINGEVMPGQWEFQVGPAVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEVIKAAIEKLGKRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1440 356 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Ssu9g1440 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 356 - -
Ssu9g1440 356 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Ssu9g1440 356 SUPERFAMILY Glutamine synthetase/guanido kinase 104 352 IPR014746 GO:0003824
Ssu9g1440 356 MobiDBLite consensus disorder prediction 37 66 - -
Ssu9g1440 356 Pfam Glutamine synthetase, catalytic domain 168 254 IPR008146 GO:0004356|GO:0006807
Ssu9g1440 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Ssu9g1440 356 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
Ssu9g1440 356 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Ssu9g1440 356 SUPERFAMILY Glutamine synthetase, N-terminal domain 13 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Ssu9g1440 356 Pfam Glutamine synthetase, beta-Grasp domain 22 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Ssu9g1440 356 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 356 IPR008146 GO:0004356|GO:0006807
Ssu9g1440 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Ssu9g1440 356 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 237 253 IPR027303 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1440 Ssu-Chr9 49428817 49432105 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1440 K01915 - gmx:547953 718.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1440 9 49428817 49432105 Ssu6g2861 6 66332630 66336522 PCT
Ssu6g2862 6 66353739 66358183 Ssu9g1440 9 49428817 49432105 PCT