Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2861 ATGTCGTTGCTCTCCGATCTAATCAGCCTTAACCTCTTCGACACCACCGAGAAGGTGATTGCCGAGTACATATGgGTTGGAGTATCCGGCATGGACATGAGAAGTAAAGCAAGGACTCTCTCAGGACCGGTTAATGACCCTTCAAGGCTTCCCAAATGGAACTATGATGGTTCCAGCACTGGTCAAGCTCCGGGTGAAGATAGTGAAGTTATGTGTGATTCTTACACTGCTGCTGGGGAACCCATTCCTACCAACAAGAGATATAATGCTGCAAAGATATTAAGCCATCCTGATGTTAAGTTACTGTATGATCTCCAAATAGGTATGGCATTGAGCAGGAATACACCTTGTTGCAGAAAGATGTCCAATGACCTCTTGGATGGCCTCTTGGTGGGACCATACTATTGTGGTACTGGTGCTAACAAGGCTTTTGGGCGTGATATTGTTGACTCACATTGCAAAGCCTGTCTTTATGCAGGCATTAACATTAGTGGAATTAATGAAGAAGTGATGCCTGGTCAGTGGGAATTCCAACTTGGTCCATCGGTTGGCATCTCTGCCAGTGATGAGTTGTGGGTTGCTCGTTACATTTTGGAGAGGATCATCGAGATTGTTGGGGTGGTGCTTTCCATTGACCCTCAACCGATTAAGTTCTTACTAACCAGGGAGATTGGAATGGTGCTGGTGCCCACACAAATTTCAGGTAATCGTGGTCACTTAAAGTCTCTAAAGAATGGGTTAGTAATTAACGTAATGTCACTTTGCTTTGGTGCTTGA 777 0.4492 MSLLSDLISLNLFDTTEKVIAEYIWVGVSGMDMRSKARTLSGPVNDPSRLPKWNYDGSSTGQAPGEDSEVMCDSYTAAGEPIPTNKRYNAAKILSHPDVKLLYDLQIGMALSRNTPCCRKMSNDLLDGLLVGPYYCGTGANKAFGRDIVDSHCKACLYAGINISGINEEVMPGQWEFQLGPSVGISASDELWVARYILERIIEIVGVVLSIDPQPIKFLLTREIGMVLVPTQISGNRGHLKSLKNGLVINVMSLCFGA 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2861 258 SMART Gln_synt_C_2 83 257 IPR008146 GO:0004356|GO:0006807
Ssu6g2861 258 PANTHER GLUTAMINE SYNTHETASE 70 217 - -
Ssu6g2861 258 PANTHER GLUTAMINE SYNTHETASE 70 217 - -
Ssu6g2861 258 PANTHER GLUTAMINE SYNTHETASE 1 71 - -
Ssu6g2861 258 SUPERFAMILY Glutamine synthetase/guanido kinase 131 216 IPR014746 GO:0003824
Ssu6g2861 258 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 88 220 - -
Ssu6g2861 258 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 86 258 IPR008146 GO:0004356|GO:0006807
Ssu6g2861 258 PANTHER GLUTAMINE SYNTHETASE 1 71 - -
Ssu6g2861 258 Gene3D - 1 87 IPR036651 GO:0004356|GO:0006542|GO:0006807
Ssu6g2861 258 SUPERFAMILY Glutamine synthetase, N-terminal domain 12 77 IPR036651 GO:0004356|GO:0006542|GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2861 Ssu-Chr6 66332630 66336522 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2861 K01915 - twl:119980325 308.145
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1440 9 49428817 49432105 Ssu6g2861 6 66332630 66336522 PCT