Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2862 ATGTCGTTACTCTCCGATCTTATCAATCTTAACCTCTCCGACACCACCGAGAAGGTGATCGCCGAGTACATATGGATCGGTGGATCGGGCATGGACATGAGGAGCAAAGCAAGGACTCTCTCAGGACCGGTTAAAGACCCTTCAAAGCTTCCCAAGTGGAACTATGATGGTTCCAGCACTGGTCAAGCTCCTGGACAAGATAGTGAAGTGATCTTATATCCACAAGCAATTTTCGGGGATCCATTCAGGAGGGGTAACAATATCCTGGTTATGTGTGATACTTACACTCCTGCTGGGGAACCCATTCCTACCAACAAGAGACATAATGCTGCAAAGATATTCGGCCATCCTGATGTTGTAGCTGAAGAACCCTGGTATGGCATTGAGCAGGAATACACGTTGTTGCAGAAAGATGTCCAATGGCCTCTTGGATGGCCTCTTGGTGGTTTTCCTGGGCCCCAGGGACCATACTATTGTGGTACTGGTGCTAACAAGGCTTTCGGGCGTGATATTGTTGACTCACATTACAAAGCCTGTCTTTACGCGGGCATTAACATCAGTGGAATTAATGGAGAAGTAATGCCCGGTCAGTGGGAATTCCAAGTTGGTCCATCAGTTGGCATCTCTGCTGGTGACGAGTTGTGGGTTGCTCGTTACATTTTGGAGAGAATTACCGAGATTGCTGGAGTAGTGCTTTCCTTTGATCCTAAACCAATTCAGGGTGATTGGAATGGTGCTGGTGCTCACACGAATTACAGTACCAAGTCCATGAGAAACGATGGTGGCTATGAAGTCATCAAAAAAGCAATTGCCAAGTTGGAAAAGAGGCACAAAGAACACATTGCTGCTTACGGAGAAGGTAATGAACGTCGTTTGACAGGACGACATGAGACAGCTAACATGAACACCTTCCTATGGGGCGTTGCAAACCGTGGTGCTTCAATTAGGGTAGGGAGGGACACTGAGAAAGTAGGGAAGGGGTATTTTGAGGATAGGAGGCCTGCGTCTAACATGGACCCTTATGTGGTCACTTCCATGATTGCAGAGACAACCATTCTTTGGAAACCGTAA 1071 0.4725 MSLLSDLINLNLSDTTEKVIAEYIWIGGSGMDMRSKARTLSGPVKDPSKLPKWNYDGSSTGQAPGQDSEVILYPQAIFGDPFRRGNNILVMCDTYTPAGEPIPTNKRHNAAKIFGHPDVVAEEPWYGIEQEYTLLQKDVQWPLGWPLGGFPGPQGPYYCGTGANKAFGRDIVDSHYKACLYAGINISGINGEVMPGQWEFQVGPSVGISAGDELWVARYILERITEIAGVVLSFDPKPIQGDWNGAGAHTNYSTKSMRNDGGYEVIKKAIAKLEKRHKEHIAAYGEGNERRLTGRHETANMNTFLWGVANRGASIRVGRDTEKVGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2862 356 Pfam Glutamine synthetase, catalytic domain 168 346 IPR008146 GO:0004356|GO:0006807
Ssu6g2862 356 ProSitePatterns Glutamine synthetase signature 1. 55 72 IPR027302 -
Ssu6g2862 356 SUPERFAMILY Glutamine synthetase, N-terminal domain 15 102 IPR036651 GO:0004356|GO:0006542|GO:0006807
Ssu6g2862 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 305 356 - -
Ssu6g2862 356 Gene3D Glutamine synthetase/guanido kinase, catalytic domain 104 304 - -
Ssu6g2862 356 SMART Gln_synt_C_2 103 351 IPR008146 GO:0004356|GO:0006807
Ssu6g2862 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Ssu6g2862 356 PANTHER GLUTAMINE SYNTHETASE 1 356 - -
Ssu6g2862 356 Pfam Glutamine synthetase, beta-Grasp domain 21 97 IPR008147 GO:0004356|GO:0006542|GO:0006807
Ssu6g2862 356 SUPERFAMILY Glutamine synthetase/guanido kinase 103 352 IPR014746 GO:0003824
Ssu6g2862 356 Gene3D - 1 103 IPR036651 GO:0004356|GO:0006542|GO:0006807
Ssu6g2862 356 ProSiteProfiles Glutamine synthetase (GS) beta-grasp domain profile. 19 99 IPR008147 GO:0004356|GO:0006542|GO:0006807
Ssu6g2862 356 ProSitePatterns Glutamine synthetase putative ATP-binding region signature. 237 253 IPR027303 -
Ssu6g2862 356 ProSiteProfiles Glutamine synthetase (GS) catalytic domain profile. 106 356 IPR008146 GO:0004356|GO:0006807
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2862 Ssu-Chr6 66353739 66358183 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2862 K01915 - gmx:547798 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2862 6 66353739 66358183 Ssu9g1440 9 49428817 49432105 PCT