Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1269 ATGGGCTTGTGGCCCAAAACTTGGAGTGGTGGTTCCATGGCCCACTATGCCATCAGCACCACTTGGTTCCCTGGCTCACTACCCTCCTCAAAGGCTTTGGTTCCTAAACATGTGGTGGGGTTTGGGCCGGTGGAAATTGCTGAAGGGTTCGATGAGGCCCACTTGGTGTGGTGGGTCCAAGCATGGACCGTGACTGCTGATGGGCTCATAACCCAGGTCAAAGAGCACGTGAACACTTCTGTGACCGTGACTCGCCTTTCACAAGTGCTTCCAAATGCTTCCAAGTGTCAATGCATTTGGCAGAGTAAGCTTTGTGATGAATCCGTGCCTGGACTTATTCTGGCAATCTAG 351 0.5242 MGLWPKTWSGGSMAHYAISTTWFPGSLPSSKALVPKHVVGFGPVEIAEGFDEAHLVWWVQAWTVTADGLITQVKEHVNTSVTVTRLSQVLPNASKCQCIWQSKLCDESVPGLILAI 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1269 116 Pfam Wound-induced protein WI12 30 116 IPR009798 -
Ssu9g1269 116 PANTHER OS07G0691300 PROTEIN 8 116 IPR009798 -
Ssu9g1269 116 PANTHER WOUND-INDUCED PROTEIN, WUN1-RELATED 8 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1269 Ssu-Chr9 46349534 46349884 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1269 - - var:108341504 175.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1269 9 46349534 46349884 Ssu9g1269 9 46349534 46349884 ECH
Ssu9g1269 9 46349534 46349884 Ssu4g2462 4 61783853 61784362 ECH
Ssu3g1018 3 23995150 23995623 Ssu9g1269 9 46349534 46349884 ECH
Ssu4g2462 4 61783853 61784362 Ssu9g1269 9 46349534 46349884 ECH