Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0614 atGGCATCATCGTCAAGGTTCCTCAAAACGTCTCTGTCTTTTGTGTTGCTCTTGCTCATCTCCATTTCCCCTTCTTTCTCCACTCCAACTTACCCCACAAGCAATGACCTTCGTTTTTCTTCAACAGCAGAAAAACTCATAAGAGGGCTTAACCTGTTCCCAAAAGATCCCATTAACACACTCAAGAATGACCCTCATTTTGTGTCAGGAAACATTGTGGAGAAGAGGTTCACTTTCCCTAGTCTTGCTGCTTCAGGATCTTCTGTTGAAGAACTTGGCCACCATGCAGGCTATTATCGCCTTCCTCGTTCCAAAGCTGCAAGGATGTTCTACTTTTTCTTTGAATCTCGAAGCAGTAAGGATGATCCGGTTGTCATATGGTTGACTGGAGGGCCAGGATGCAGCAGTGAACTAGCTTTGTTTTACGAAAATGGTCCTTTTCAGCTTACCAAGAACTTATCTCTTGTGTGGAATGACTATGGCTGGGACAAGgcatcaaatattttatttgtagacCAACCTACTGGGACGGGTTTCAGCTATACTTCTGACGACAGTGACATTCGCCATGATGAAGAGGGTGTTAGCAATGATTTGTATGACTTCTTACAGGCATTTTTCAAGGAGCACCCTCAGTTCACTAAGAATGACTTTTATATTACTGGAGAGTCATATGCTGGACACTACATTCCAGCTCTTGCATCCAGGGTTCACCAAGGAAACAAAGCAAAAGAAGGAAATCATATAAATCTAAAGGGTTTTGCTATTGGCAACGGGTTAACCAATCCTGAAATTCAGTACCAGGCGTATACAGACTATGCATTAGACAGGGGACTAATTAAAAAGGCCGATTATGACAGTATCAACAAGTTGGTCCCACCATGCGAGCAGGCCATTAAAACTTGCGGCACTGAAGGTGGTGAAACATGCATATCTTCATTATATGCTTGCAATAAGATATTCAATCAGATCATGTCTATAGCTGGTGATGTTAATTACTATGACATTAGAAAGCAATGTGTTGGAGATCTGTGTTATGACTTCTCTGACATGGAGGATTTCTTAAACAAGAAGACAGTGAGAGATGCTTTAGGTGTTGGGGACTTGGACTTCGTTTCATGCAGTAGCACAGTGTATAGTGCTATGATGCAAGATTGGATGAGAAATCTGGAAGTGGGTATCCCGGCACTTCTTGAGGAAGGAATCAAGGTTCTTGTGTATGCTGGAGAAGAAGATCTCATATGCAATTGGCTCGGGAATTCAAGGTGGGTTCATGCAATGGAGTGGTCGGGTCAAAAAGAATTTGGGGCGTCTCGTACAGTCCCATTTTTGGTTGAAGGTGCAGAAGCAGGAACGCTGAAAAGCCATGGACCTCTCGCTTTCCTCAAGGTATATGAGGCTGGTCACATGGTCCCTATGGATCAACCAAAAGCTGCACTTGAGATGCTAAGAAGCTGGATGCAAGGGAAACTGACAATGACAAGGAGTGGAGATAACGTCTCTCCTAAATGA 1512 0.4286 MASSSRFLKTSLSFVLLLLISISPSFSTPTYPTSNDLRFSSTAEKLIRGLNLFPKDPINTLKNDPHFVSGNIVEKRFTFPSLAASGSSVEELGHHAGYYRLPRSKAARMFYFFFESRSSKDDPVVIWLTGGPGCSSELALFYENGPFQLTKNLSLVWNDYGWDKASNILFVDQPTGTGFSYTSDDSDIRHDEEGVSNDLYDFLQAFFKEHPQFTKNDFYITGESYAGHYIPALASRVHQGNKAKEGNHINLKGFAIGNGLTNPEIQYQAYTDYALDRGLIKKADYDSINKLVPPCEQAIKTCGTEGGETCISSLYACNKIFNQIMSIAGDVNYYDIRKQCVGDLCYDFSDMEDFLNKKTVRDALGVGDLDFVSCSSTVYSAMMQDWMRNLEVGIPALLEEGIKVLVYAGEEDLICNWLGNSRWVHAMEWSGQKEFGASRTVPFLVEGAEAGTLKSHGPLAFLKVYEAGHMVPMDQPKAALEMLRSWMQGKLTMTRSGDNVSPK 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0614 503 SUPERFAMILY alpha/beta-Hydrolases 94 490 IPR029058 -
Ssu8g0614 503 Pfam Serine carboxypeptidase 92 489 IPR001563 GO:0004185|GO:0006508
Ssu8g0614 503 Gene3D alpha/beta hydrolase 72 500 IPR029058 -
Ssu8g0614 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 158 170 IPR001563 GO:0004185|GO:0006508
Ssu8g0614 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Ssu8g0614 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 171 181 IPR001563 GO:0004185|GO:0006508
Ssu8g0614 503 PRINTS Carboxypeptidase C serine protease (S10) family signature 206 231 IPR001563 GO:0004185|GO:0006508
Ssu8g0614 503 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 492 IPR001563 GO:0004185|GO:0006508
Ssu8g0614 503 ProSitePatterns Serine carboxypeptidases, serine active site. 220 227 IPR018202 GO:0004185
Ssu8g0614 503 PANTHER SERINE CARBOXYPEPTIDASE 3 31 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0614 Ssu-Chr8 10038799 10042229 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0614 K16298 - gmx:100785987 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0614 8 10038799 10042229 Ssu8g0614 8 10038799 10042229 ECH
Ssu8g0614 8 10038799 10042229 Ssu3g2452 3 76207193 76209758 PCT
Ssu3g2451 3 76183720 76186887 Ssu8g0614 8 10038799 10042229 PCT