Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0451 ATGGTGTTGCAGAAGAGGTTAGACTATAGCTTTAATGGCCATCAGGTGCCAACCAAGCGCCGAGCTACTCGATCAGCTAGGAGGAGGGCTACATTTCAAAGAAGGTTGGAAGACAATCAAATGTGTGCATTTGACTTATTGGCCACCGTAGCTGACAATTTATTGCAAGAGAAACAGAATCCAACCACATCTAGTGATAGATCATCGGAAAAGGATAAGGATGTATTTGTTAAAGAGGAGTGCCAGGATGCAAATAAACCATTCAAAGCTGAGCTTTCTGATGAAGCTAGTTGTGACAGAAGATGTCAGCATGAATTTGTTAAAGAAGGGTGCCCAGATGCAAATAAACCATTCAAAGCTGAGCTTTCCGATGAGGGAAGTAGTGACAGAAAATGTTTCTCTAATATTTCTTCACAAGTATACAATCAAAATTACTGTTTGAAGGAACTCCCGCAACATGAAATTGATGGCCATTCATGCATTGCTTCTATAGTAACAAGTTCTAGTTGCTCAGACAGGTTTGTTGCTGAGACGCTGGTGGATGGAAAAGGCCAAAATGGAATGGAAAATTTAGCTAGCAAAGTTGAATTAAGTTCCTCTGGATGTCCAGAGAATAGTGGTTGCAAGTTAGATGGTGATGTAAGTAAAGTAAAAGATGGTAAGTTTGGGAAGGTTCCCATTGATACTGGAACTGGGTTGTGCTGTTCTGAGGATCCCTTGGATGAAAAACCTCCAGCACTGATCAGTTCATATGGCAATGCCAAGTTGTCTGGGCATGATGACAGCATGCCTCAGTGCTCATTGTCCAAAGGTTGTGACAATGTACTCGTAGATAGTAGAGATGATGACGAAAACTTTTCTGGGTGTGCTCACCCTCGTACCAAAATAAAGTCCTTTAGGCCAATTACTTGTATagatgatagaaaaataaagaaaagattgGCTTCTAAATATCATAAAGTTGCTGAAGAATCAAAGCACAATACACTATCTAACAGTGTTTTGGATGGAAATTTGAAGCCAGTTTACAGCAGTAGGAAGAACTATTATAAAAGCCAAAGATCTCAAATGAATATTCCTTTCAAAAAGAGGAAGCTTTTTCACTGTAGCTCTGATACAAATTCTAACGGATATATCAGAAGTGGTGACACTTATTATTCTCCTAACAATGACACAAATCAAAGTGTTTCTTGTTCATCTTCTGGGATGAGTAAAGATCATGGAACGTCATCCTTGGGACACTCTGCGCTACGATCTAGAGATTCTCATGTGAAGCTTAGGATCAAATCATTTAGAGTGCCTGAGCTTTTTATTGAGATTCCAGAAACTGCAACCATTGGGTCCTTGAAGAGGACAGTGATGGAGGCAGTGACTGCCATACTTGGGGGTGGATTGCGTGTGGGTGTGATTCTCCATGGAAAGAAGGTTAGAGATGACAGTAAAACTCTACTTCAGACTGGAATTTCTCATGATGACCACCTGGATGCTTTGGGCTTCACCCTGGAGCCTAATTCTTTGCAAAACCTACCAACTGCATGTGCTACAGATTATCTCCGTGTTCCTAGTGCAGACAAGCCTCAGTCTTTAACAGGGTATCCTTCAAGTCCTGCTGCAATGCATCAGAGGGTTCAGGGCTTTTCTAACATGTTAGCCGAGCATCAAGTAACCGGTTTAGGTAACCTTGTTGAAAGTGATCATGATTCAGCACCTTCTCCTATCAACACATCAGGTGAAAGAAAATTGGCAGATTCCAAAGAACTGATTACTGTTCCTGAAAGGGGTATGGAGGCACTAGCTGTGCTACCTATGCATCAGAAGTCAAAGCGAACTGAGATCGCACAGCGCCGAATTCGTAGGCCTTTTTCGGTTGCTGAAGTTGAAGCACTGGTTCAAGCAGTTGAGAAACTTGGAACTGGAAGGTGGCGTGATGTTAAACTTCGTGCTTTTGATAATGCAAAGCATCGGACATACGTGGATTTGAAGGATAAATGGAAAACACTGGTGCACACGGCAAGAATATCTCCTCAGCAAAGGAGGGGAGAGCCTGTTCCCCAAGAACTTTTGGACAGGGTCCTAACTGCCCACGCATATTGGTCCCAGCAGCAAACTAAGCAACAGCTCAAGCAGCACCCAAAACCTTGTCTTCTCCTTTGA 2154 0.4201 MVLQKRLDYSFNGHQVPTKRRATRSARRRATFQRRLEDNQMCAFDLLATVADNLLQEKQNPTTSSDRSSEKDKDVFVKEECQDANKPFKAELSDEASCDRRCQHEFVKEGCPDANKPFKAELSDEGSSDRKCFSNISSQVYNQNYCLKELPQHEIDGHSCIASIVTSSSCSDRFVAETLVDGKGQNGMENLASKVELSSSGCPENSGCKLDGDVSKVKDGKFGKVPIDTGTGLCCSEDPLDEKPPALISSYGNAKLSGHDDSMPQCSLSKGCDNVLVDSRDDDENFSGCAHPRTKIKSFRPITCIDDRKIKKRLASKYHKVAEESKHNTLSNSVLDGNLKPVYSSRKNYYKSQRSQMNIPFKKRKLFHCSSDTNSNGYIRSGDTYYSPNNDTNQSVSCSSSGMSKDHGTSSLGHSALRSRDSHVKLRIKSFRVPELFIEIPETATIGSLKRTVMEAVTAILGGGLRVGVILHGKKVRDDSKTLLQTGISHDDHLDALGFTLEPNSLQNLPTACATDYLRVPSADKPQSLTGYPSSPAAMHQRVQGFSNMLAEHQVTGLGNLVESDHDSAPSPINTSGERKLADSKELITVPERGMEALAVLPMHQKSKRTEIAQRRIRRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFDNAKHRTYVDLKDKWKTLVHTARISPQQRRGEPVPQELLDRVLTAHAYWSQQQTKQQLKQHPKPCLLL 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0451 717 MobiDBLite consensus disorder prediction 381 416 - -
Ssu8g0451 717 ProSiteProfiles Myb-like domain profile. 613 668 IPR001005 -
Ssu8g0451 717 Gene3D - 606 710 - -
Ssu8g0451 717 PANTHER TELOMERE REPEAT-BINDING PROTEIN 2-RELATED 1 717 - -
Ssu8g0451 717 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 613 672 IPR017930 -
Ssu8g0451 717 SUPERFAMILY Homeodomain-like 619 700 IPR009057 -
Ssu8g0451 717 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 717 IPR031105 -
Ssu8g0451 717 CDD SANT_TRF 619 669 - -
Ssu8g0451 717 SUPERFAMILY Ubiquitin-like 419 505 IPR029071 -
Ssu8g0451 717 SMART sant 617 670 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0451 Ssu-Chr8 7167749 7171585 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0451 - - gmx:100780881 1226.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0451 8 7167749 7171585 Ssu8g0451 8 7167749 7171585 ECH
Ssu8g0451 8 7167749 7171585 Ssu6g2925 6 67436028 67440726 ECH
Ssu8g0451 8 7167749 7171585 Ssu3g2640 3 80005054 80009519 PCT