Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2925 ATGGTGTTGAAGAAAAGGCTTGATTATGGATTCCGGGGCTTTCAGGTCCCAATTATACCTAGACATCCTAGATCTGCAAGAAGGAGGGTTCCTTTCAAGAAACCAGCTGAGGATGGCCAAGCTTGTGCTTTTGAACTACTGGCATCTTTAGCTGGCAAGTTGTTGCAGGAGAGTGAAAGTTCCGCTTCTAGCAATGCATCTGAAGGAAATCATCAGCCGGCCTTTAGCCAATGTGTTGTTGAGCAGAACAGACGTGATGAAGTTAAACCATTAACAGAAGAGGGAATTCATAATGGAAGTTGTGCAGAGAGTATTTTCACGACTAAGGTGGGCTCACGAAAGAGTGGTGAGAAACCCCTTGAGTATGTAGAGACTGATAGTGTATTAGAATGCATTTCAGCTAAAAACAATTCTGACTGTTGGGAGAAAATCAAAGCTGGTGTGAGGTCTGAAATTTTCAAATGGGAGAATAAGTTTGCACATCATTCTAATAGATTAGTAGAAGTACCTGAAGATCAAGAGGCTGGCAATTCGGCTTTCGAGGGATTATCTTTGGATAATAAAGTTACTTTGAATGATCCATTGGAGTTGTGCATTAACTCTCCTGCACTAGTTAATTCGAACAGTGATGTTAAATCTCCAGTTCGTAGGGAACCGTTTCCCAATGCCTCCTTTTCTGGGCATGGGAATGATATTAAGTTAGGTTTTATTGATGATGACGAAAACTTTATAAGGCGCAACAAAGTTTGCACCAAGTCAAAAGCTTTTAGACCTCAACAATGCATTTCACACTGCATAATCAGGAAGCGGTTGACTTCCAAAACGTGGAAGGTTGCTCCAAAGTTGAAGGACTGTGAACATTCGAGATCTGATGAGGGTGTAAAAACTCTAAATCGTAAGAGGAAGACTTGCTACAGTTTTGAAAGACCTCAGCATTGCACTCCTTTCAAGCGTAGGAAATTCTTTGAAAGGGGTTCAGTGGTAACTTCTGATGGAGGATTCAGCAGTGACAGTGTATCTGATTCACGTGAGAAAGGAATTGATGGAGAAAACCCTGGCTCATCTGGAAAACTGCAAGAATCTAAGGATTCTCCTGTTAAGTTTAGCATCAAGTCATTCAGGATACCAGAACTTTATATTGATGTTCCTGAAATTGCCACTGTTGGTTCATTAAAGAGGACAGTCATGGAGGCAGTGATGACTATACTTGGAGGTGGAGTGCATGTCGGTGTTCTTGTtcaggggaaaaaaataaaagacgaCAACAAAACTCTTCTTCAGACTGGTGTATCTTGTGAAGAAAATCTGGATAAACTCGGTTTCATGTTGGAACCCAGTTCTTTTCAAGCTTCTCCAACTGTTTGTGTTGGGGATCCTTCTCAATGCAAAACACCCCAGCCTTCCAGGTCCCAAGGAACTCCCATCTTAGATTCAGGGCTTACTGATGCCATACAGGAATCCTCCTTGCTGACAAATACTGGCAACCTTGTCAAAATTAACCATGACTCTACTTCTTCCCTGACTGACACTACAGCTGATAAACTAACACCAGTTTCCAGAGCCCTAGTTACTGTTCCAGATAGGAGTACAGAAGCATTAGCTCTTGTTCCTGTGAATCAGAAAACCAGGCGCTCTGAGCTTGTACAGCGTCGAACTAGGAGACCATTCTCTGTGTCTGAAGTAGAAGCACTTGTTCAGGCAGTTGAGGAACTTGGAACTGGAAGGTGGCGCGACGTAAAGTTCCAAGCATTTGAAAGTGCAGACCATAGGACTTATGTGGACTTGAAGGATAAATGGAAAACATTAGTGCACACTGCAAAGATCTCCCCTCAACAAAGGAGAGGAGAGCCTGTCCCCCAGGAGCTATTGAACAGGGTTTTGGCTGCCCATGCTTACTGGTCTCACCACCAAACCAAGCAGCATGGCAAGCATCAAGCTGCAACCATGAAGATCATAGAAGCCTAA 1965 0.4265 MVLKKRLDYGFRGFQVPIIPRHPRSARRRVPFKKPAEDGQACAFELLASLAGKLLQESESSASSNASEGNHQPAFSQCVVEQNRRDEVKPLTEEGIHNGSCAESIFTTKVGSRKSGEKPLEYVETDSVLECISAKNNSDCWEKIKAGVRSEIFKWENKFAHHSNRLVEVPEDQEAGNSAFEGLSLDNKVTLNDPLELCINSPALVNSNSDVKSPVRREPFPNASFSGHGNDIKLGFIDDDENFIRRNKVCTKSKAFRPQQCISHCIIRKRLTSKTWKVAPKLKDCEHSRSDEGVKTLNRKRKTCYSFERPQHCTPFKRRKFFERGSVVTSDGGFSSDSVSDSREKGIDGENPGSSGKLQESKDSPVKFSIKSFRIPELYIDVPEIATVGSLKRTVMEAVMTILGGGVHVGVLVQGKKIKDDNKTLLQTGVSCEENLDKLGFMLEPSSFQASPTVCVGDPSQCKTPQPSRSQGTPILDSGLTDAIQESSLLTNTGNLVKINHDSTSSLTDTTADKLTPVSRALVTVPDRSTEALALVPVNQKTRRSELVQRRTRRPFSVSEVEALVQAVEELGTGRWRDVKFQAFESADHRTYVDLKDKWKTLVHTAKISPQQRRGEPVPQELLNRVLAAHAYWSHHQTKQHGKHQAATMKIIEA 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2925 654 SUPERFAMILY Homeodomain-like 554 634 IPR009057 -
Ssu6g2925 654 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 549 607 IPR017930 -
Ssu6g2925 654 Gene3D - 541 645 - -
Ssu6g2925 654 CDD SANT_TRF 554 604 - -
Ssu6g2925 654 MobiDBLite consensus disorder prediction 330 363 - -
Ssu6g2925 654 PANTHER TELOMERE-BINDING PROTEIN, PUTATIVE-RELATED 1 651 - -
Ssu6g2925 654 ProSiteProfiles Myb-like domain profile. 548 603 IPR001005 -
Ssu6g2925 654 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 651 IPR031105 -
Ssu6g2925 654 SMART sant 552 605 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2925 Ssu-Chr6 67436028 67440726 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2925 - - lang:109356744 847.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu8g0451 8 7167749 7171585 Ssu6g2925 6 67436028 67440726 ECH
Ssu6g2925 6 67436028 67440726 Ssu6g2925 6 67436028 67440726 ECH