Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu8g0147 ATGAGTCATGCATATTCTCAAATGGGCTCTGGTAGTAGAACCACTCGAAGAGCTTTTGAGTTTGGGAAGACACATGTAGTGAGGCCAAAAGGAAAACACCAAGCCACTATAGTTTGGCTGCATGGTCTTGGTGATAATGGTTTGAGCTCCTCTCAGCTCCTGGAATCCCTTCCACTTCCAAATATAAAATGGATTTGCCCAACTGCTCCTACCCGTCCTGTGGCAATACTTGGTGGTTTTCCCTGCACTGCATGGTTTGATGTGGGAGAACTTTCAGAAGATGGTCCAGATGACTGGGAGGGTTTAGATGCCTCAGCAGCACACATTGCTAACTTATTGTCAACGGAGCCAGCTGATGTGACAGTTGGTATTGGAGGCTTCAGCATGGGTGCTGCAATATCCCTATACTCTGCAACTTGTTTTGCCATGGGAAGGTATGGAAATGGCATCCCATACCCTGTCAACTTAAGAACAGTGGTTGGACTAAGTGGTTGGCTTCCCGGATCAAGGTATATTACAGGATTATTTGTTCTACAAGCACTGCACTTATGCTGA 555 0.4613 MSHAYSQMGSGSRTTRRAFEFGKTHVVRPKGKHQATIVWLHGLGDNGLSSSQLLESLPLPNIKWICPTAPTRPVAILGGFPCTAWFDVGELSEDGPDDWEGLDASAAHIANLLSTEPADVTVGIGGFSMGAAISLYSATCFAMGRYGNGIPYPVNLRTVVGLSGWLPGSRYITGLFVLQALHLC 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu8g0147 184 Gene3D alpha/beta hydrolase 14 180 IPR029058 -
Ssu8g0147 184 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 170 - -
Ssu8g0147 184 SUPERFAMILY alpha/beta-Hydrolases 25 170 IPR029058 -
Ssu8g0147 184 Pfam Phospholipase/Carboxylesterase 24 169 IPR003140 GO:0016787
Ssu8g0147 184 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu8g0147 Ssu-Chr8 2139912 2142354 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu8g0147 1 168 Acyl Lipid Metabolism Gene Families AT1G52700 79.167 3.90e-97 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu8g0147 K06130 - gmx:100798395 343.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g3407 4 84699683 84702401 Ssu8g0147 8 2139912 2142354 ECH
Ssu1g1936 1 53989220 53996187 Ssu8g0147 8 2139912 2142354 ECH
Ssu8g0147 8 2139912 2142354 Ssu8g0147 8 2139912 2142354 ECH
Ssu8g0147 8 2139912 2142354 Ssu4g3407 4 84699683 84702401 PCT