Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2452 ATGGGGTTATATGAGCATTCAGATGTTGTGCAGTGGGGTATTAATCTTTTTGACAGTGACCCTGCTTATAGTCCTGGATACTATGGTGACATAATTCAACATGATACTAGTGATGTCTATAATGGACACTACTTCCATAGCCATTATGATACTGAAAGTAACCAAATAGAAAATGATGAGATCATTGCACGGGCTCTTCAAGAAGAGTTTTCCCGGCTAGATATTGCTGAGTGTTCAAGATATTCACAGACAAATGAAGAACAGTTCCATGCTTCTGAGCCTGCATATGATTGGCATAACACATCGATGATGAACTATTGTTCAGGAGGTCATGATTATGCCTACGATGGAGTTGGTGACATAGAACCTTCTAGTTCATCAAGTTGTAGTCCTTGTGAAGCAGAGGAATGCTCATTGGAGCTTACTGACAATTATCCACTTGATGATGAAATAGGGAAGAGATTGAGTCAGATGGTTCCAATTCCTCATGTTCCCAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGatTGCAGTTATATGACTTTGTGGAGCATATGGTACAAGGTGACGGTAATTGTCAGTTCCGTGCATTATCTGATCAACTATATAACACACCTGATCACCACAAGGATGTGAGACGACAAGTTGTGAATCAGCTGAAGTCTCATCCAGAGATTTATGAAGGATATGTTCCCATGGAATATGGCGAATATTTGGAGAAGATGTCTAAGAGTGGTGAATGGGGGGATCATGTTACTCTACAAGCAGCTGCAGATTCGTATGGTGTGAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATTCTTCCTCATTTTGAGAAGCCAAAAGGAGTGATTTTCCTTAGTTTTTGGGCAGAGGTGCATTACAACTCCATCTATCCTCAAGGaggtaattttacaaaattttcatatttagcTCGAATCAGTTTCCAACAAGCTCACCAATGGTTTGTATAA 1023 0.3881 MGLYEHSDVVQWGINLFDSDPAYSPGYYGDIIQHDTSDVYNGHYFHSHYDTESNQIENDEIIARALQEEFSRLDIAECSRYSQTNEEQFHASEPAYDWHNTSMMNYCSGGHDYAYDGVGDIEPSSSSSCSPCEAEECSLELTDNYPLDDEIGKRLSQMVPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHMVQGDGNCQFRALSDQLYNTPDHHKDVRRQVVNQLKSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFEKPKGVIFLSFWAEVHYNSIYPQGGNFTKFSYLARISFQQAHQWFV 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2452 340 PANTHER CYSTEINE PROTEINASE SUPERFAMILY PROTEIN 26 320 - -
Ssu7g2452 340 PANTHER OTU DOMAIN CONTAINING PROTEIN 26 320 - -
Ssu7g2452 340 ProSiteProfiles OTU domain profile. 193 317 IPR003323 -
Ssu7g2452 340 Gene3D - 174 322 - -
Ssu7g2452 340 SUPERFAMILY Cysteine proteinases 179 317 IPR038765 -
Ssu7g2452 340 Pfam OTU-like cysteine protease 199 285 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2452 Ssu-Chr7 47694780 47698434 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2452 - - gmx:100811851 616.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2452 7 47694780 47698434 Ssu7g1101 7 24390988 24397966 ECH
Ssu7g2452 7 47694780 47698434 Ssu7g2452 7 47694780 47698434 ECH
Ssu4g1005 4 16086312 16090190 Ssu7g2452 7 47694780 47698434 PCT