Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1101 ATGGCAACTCATGACATGGATCCTGATGTTGTTCGCTGGGGACTTCATCTCCTAGATGTTTGCACACTTTCCCACCGTGGTTCACCTAGTATTGTAAGTCAATATGATCCTGATTTAAGTCGAGTTGAATATGTTAGAGAAGGCTTCTGTCAGCATGCGTATGTGGAGAATGATGAGGCTGTTGCACGAGCTTATCAAGAAGAGTTATCGCAACTTGATTCCATGGGAGATTCTGGGATATCCAATTTTGAGAATGAGGGAATGCAAGGATCTGTTTATTCGCAAGATTGGCCTCATTCTTCAAATGGAAACTATAACTTTGGCAATGAGTCTTGCCAGAACTCTGTAGATGAGTCCTATAGTATGAAAGAAGTGGAGAATTATGGTCCAAGTGAAAGGGAAAATGTTGTGCATGAAAATGATGTTTTTGGTTCGTCTTCTGGGTCAGTAGAGGTACCTGTTACTAGTGATGACTTCTGGGATTCGTTGGAAATATCGGATGAATCTTCTCTTGATGGTGAAGTTGGCAAAAGATTAAATCAGATGGTTCCCATTCCTCATATTCCTAAAACCAATGAAAAAATACCATCTGATGACGAAGAAATATCAGATCATCAAAGGCTTCTAGACAGATTGCAGTTATATGATCTGATTGAGTGTAAGGTTCAAGGAGATGGTAACTGCCAGTTCCGTTCTTTATCTGATCAACTCTATCGTTCTCCGGATCACCACAAATTTGTGCGGGAGCAAATTATTCAACAGCTCGAATCTTACCCAGAACTATATGCTGGTTATGTTCCCATGGCTTATAGTGATTATTTGAAGAAGATGAGCAAGTATGTTCATATCTTTCATTATCCGATGCTATTTCTAATGTTATGGCTTTATTGTAGTCCTTTGTGTTCACTGATAGCTTTTTTGTGTGGATGTACCAGGAGTGGTGAATGGGGTGATCATGTCACATTGCAGGCTGCTGCAGATTGGTATGGTgtcaaaatttttgttattacatCTTTTAAGGACACGTGTTACATTGAGATTCTTCCACTGATACAGAAATCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAATTCAATTTATCCAGAAGGAGAATTGCCTTTATCATCATCTCatgcaaagaaaaagaagaaatggtgGAATTTCGGTGGCTAG 1188 0.3847 MATHDMDPDVVRWGLHLLDVCTLSHRGSPSIVSQYDPDLSRVEYVREGFCQHAYVENDEAVARAYQEELSQLDSMGDSGISNFENEGMQGSVYSQDWPHSSNGNYNFGNESCQNSVDESYSMKEVENYGPSERENVVHENDVFGSSSGSVEVPVTSDDFWDSLEISDESSLDGEVGKRLNQMVPIPHIPKTNEKIPSDDEEISDHQRLLDRLQLYDLIECKVQGDGNCQFRSLSDQLYRSPDHHKFVREQIIQQLESYPELYAGYVPMAYSDYLKKMSKYVHIFHYPMLFLMLWLYCSPLCSLIAFLCGCTRSGEWGDHVTLQAAADWYGVKIFVITSFKDTCYIEILPLIQKSGRVIFLSFWAEVHYNSIYPEGELPLSSSHAKKKKKWWNFGG 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1101 395 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 310 393 - -
Ssu7g1101 395 PANTHER OTU DOMAIN CONTAINING PROTEIN 22 279 - -
Ssu7g1101 395 ProSiteProfiles OTU domain profile. 217 374 IPR003323 -
Ssu7g1101 395 SUPERFAMILY Cysteine proteinases 179 373 IPR038765 -
Ssu7g1101 395 Gene3D - 304 379 - -
Ssu7g1101 395 Gene3D - 198 283 - -
Ssu7g1101 395 PANTHER OTU DOMAIN CONTAINING PROTEIN 310 393 - -
Ssu7g1101 395 PANTHER OTU-LIKE CYSTEINE PROTEASE DOMAIN CONTAINING PROTEIN 22 279 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1101 Ssu-Chr7 24390988 24397966 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1101 - - gmx:100820379 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2452 7 47694780 47698434 Ssu7g1101 7 24390988 24397966 ECH
Ssu7g1101 7 24390988 24397966 Ssu7g1101 7 24390988 24397966 ECH
Ssu7g1101 7 24390988 24397966 Ssu7g1101 7 24390988 24397966 PCT