Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2097 atgGTCTCTCTTTTCTCCATCGCTTCCCGTCTCAGGGATAAGCAAAAGAAAGACACTAAAAAAACTATCCACAGCATCAAAGTTGGAATATCCCTTGTTTTGATTTCCCTTCTGTACCTCTTGGATCCTCTCTATGATCAAGTTGCAGAAAATGCAATGTGGGCTATCATGACTGTTGTCGTTACCTTTGAATTTTCTGCAGGAGCTACGCTGGGCAAAGGTTTAAATCGCGGAATGGGAACTATATTAGGAGGTGGACTGGGTTGTATAGCAGCAGTTCTGGCCCAAAGCCTTGGTGGAGTTGGCAACTCGATTATCATTGGTACTTCTGTATTTATCTTCGGAACAATTGCAACATATTTTCGACTATTCCCTAGCGTCAAGAAGAGATACGATTACGGAGTGATGATTTTTATCCTCACTTTTAATTTGGTTGTGGTGTCTGGTGTGCGCACTCAAGATCAGAAAGTTTGGGAAATAGCACGTGAACGTCTTTTAACAATTCTAATGGGTTTCATTGTGTGCATTTGTGTGAGCTTGTTGATCTTCCCCTTGTGGGCCAGCGATGAACTTCATGATTCCACTGTCTCTAGATTCCAAGACCTTGCCACTTCATTACAAGGCTGCTTGGAGGAATATGTCAAATTCGctagtgaaaaagaaaataagcctGGTGCTAGTAGCTTCACTGTTTGCAAGTCCTTGTTGGATTCGAAATCAAAGGATGAGTTGCTGGCAAATTTCGCAAAATGGGAACCTTGGCATGgaaattttggatttttctaTCCTTGGGAGAAATACCTAAAGATTGGAGGGGTTCTTCGAGAACTGGCTGCAATTATTCTTGCTCTAGGAGGTTGCCTTGAAGCCTCGACCACGATGGCATTGGCATCTGTGAGTCAAACAGTCCAATTCGAATCTTGTGAAGCAATTGGGTCACGGATTGTGTGGACTCTGCGAGAACTTGGAGACAGCATGAAGCAAATGAGGAAATGTGAGGCAGAGCCTCACATATCACCAAAGTTGAAGGCAGCGAAAGCAGAGCTAAGCTTGGTGATTTCCGCGTCCAAGATTGCAGCAATTGAGAATATTGATGCACTAGCAGTAGCGAGCTTCGTGTTCTTACTCAAGAAAGTGGTGGACAAAGTAGAAGAACTGACCAAAGAGGTGGAGCAAGTTGGAGACATTGCTGGTTTTTGTGCTCATTCAACTTTCGTCTCTTCGTAA 1227 0.4238 MVSLFSIASRLRDKQKKDTKKTIHSIKVGISLVLISLLYLLDPLYDQVAENAMWAIMTVVVTFEFSAGATLGKGLNRGMGTILGGGLGCIAAVLAQSLGGVGNSIIIGTSVFIFGTIATYFRLFPSVKKRYDYGVMIFILTFNLVVVSGVRTQDQKVWEIARERLLTILMGFIVCICVSLLIFPLWASDELHDSTVSRFQDLATSLQGCLEEYVKFASEKENKPGASSFTVCKSLLDSKSKDELLANFAKWEPWHGNFGFFYPWEKYLKIGGVLRELAAIILALGGCLEASTTMALASVSQTVQFESCEAIGSRIVWTLRELGDSMKQMRKCEAEPHISPKLKAAKAELSLVISASKIAAIENIDALAVASFVFLLKKVVDKVEELTKEVEQVGDIAGFCAHSTFVSS 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2097 408 Pfam Aluminium activated malate transporter 16 357 IPR020966 GO:0015743
Ssu7g2097 408 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 399 - -
Ssu7g2097 408 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2097 Ssu-Chr7 41375326 41379945 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2097 7 355 Miscellaneous Gene Families AT4G17970 41.547 4.74e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2097 - - gmx:100527892 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2097 7 41375326 41379945 Ssu7g2097 7 41375326 41379945 ECH
Ssu4g1330 4 22019988 22022584 Ssu7g2097 7 41375326 41379945 PCT
Ssu4g0791 4 12273081 12275448 Ssu7g2097 7 41375326 41379945 PCT