Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2033 ATGGACAAGGTTATGAGGTTGGCCACAGAAAAGGGTGTGGTGGTTTTCACCAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTCCAAGAACTTGGAGTGAACCCTGTGGTTCATGAAATTGACAAAGACCCTGAAGGCAAAGAAATGGAGAAAGCTATAACTAGGTTGGGTTGTCCTGCACCTGTCCCGGCAGTGTTCATCGGAGGGAAGCTGGTGGGGTCCACCAATGAAGTCATGTCCCTCCACCTTAGTGGTTCACTTACTCCACTGTTGAAACCATATCGAACTTCATCTTGA 306 0.4771 MDKVMRLATEKGVVVFTKSSCCLCYAVNILFQELGVNPVVHEIDKDPEGKEMEKAITRLGCPAPVPAVFIGGKLVGSTNEVMSLHLSGSLTPLLKPYRTSS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2033 101 CDD GRX_GRXh_1_2_like 13 93 - -
Ssu7g2033 101 SUPERFAMILY Thioredoxin-like 1 97 IPR036249 -
Ssu7g2033 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 97 IPR011905 -
Ssu7g2033 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Ssu7g2033 101 Pfam Glutaredoxin 13 75 IPR002109 -
Ssu7g2033 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 99 - -
Ssu7g2033 101 Gene3D Glutaredoxin 1 100 - -
Ssu7g2033 101 PANTHER GLUTAREDOXIN 1 99 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2033 Ssu-Chr7 40405564 40405869 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2033 1 95 Miscellaneous Gene Families AT4G15670 51.579 1.27e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2033 K03676 - gmx:100527558 189.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2033 7 40405564 40405869 Ssu7g2033 7 40405564 40405869 ECH
Ssu4g0692 4 10816026 10816331 Ssu7g2033 7 40405564 40405869 PCT
Ssu7g2033 7 40405564 40405869 Ssu4g0691 4 10813688 10813996 PCT