Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0692 ATGGACAAGGTGATGAGGTTGGCCTCTGAAAAGGGTGTGGTGATTTTCTCAAAGAGCTCTTGTTGCCTCTGCTATGCAGTCAACATTCTGTTTCATGAACTTGGGGTGAGTCCTGTGGTTCATGAGATTGATCATGACCCTGAAGGCAGAGAAATGGAGAAAGCCCTATTGAGGCTAGGCTGCACTGCTCCAGTTCCAGCTGTGTTCATAGGAGGGAAGCTAAAGGGATCCACCAATGAAATCATGTCCCTCCACCTAAGTGGTTCACTCACTCAATTGCTGAAACCTTACCAGGCGTTATCTTGA 306 0.4739 MDKVMRLASEKGVVIFSKSSCCLCYAVNILFHELGVSPVVHEIDHDPEGREMEKALLRLGCTAPVPAVFIGGKLKGSTNEIMSLHLSGSLTQLLKPYQALS 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0692 101 CDD GRX_GRXh_1_2_like 13 93 - -
Ssu4g0692 101 Pfam Glutaredoxin 13 74 IPR002109 -
Ssu4g0692 101 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 100 - -
Ssu4g0692 101 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 100 IPR011905 -
Ssu4g0692 101 SUPERFAMILY Thioredoxin-like 1 99 IPR036249 -
Ssu4g0692 101 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Ssu4g0692 101 Gene3D Glutaredoxin 1 101 - -
Ssu4g0692 101 PANTHER GLUTAREDOXIN 1 100 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0692 Ssu-Chr4 10816026 10816331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0692 1 100 Miscellaneous Gene Families AT4G15660 50.000 1.09e-33 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0692 K03676 - gmx:100499748 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0692 4 10816026 10816331 Ssu4g0692 4 10816026 10816331 ECH
Ssu4g0692 4 10816026 10816331 Ssu7g2033 7 40405564 40405869 PCT