Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0691 ATGGATAGAGTTAAGGATTTGGCATCAAAGAAGGCCGCTGTTATATTTACCAAGAGTTCATGTTGCATGTGTCACAGCATCAAGCAACTTTTCTATGAGCTTGGAGCAAGCCCAGCAGTTCATGAGCTTGACAATGATTCCTACGGGAGGGAAATGGAGTGGGCTTTAAAGGGTATGGGCTGTAACCCTTCAGTCCCAGCAGTGTTCATAGGTGGAAAATTTGTGGGCTCATCCAAAGATGTGATATCCCTCCATGTTGATGGCTCTCTCAAACAATTGCTCATTGATGCAAAGGCCATCTGGTTTTAG 309 0.4466 MDRVKDLASKKAAVIFTKSSCCMCHSIKQLFYELGASPAVHELDNDSYGREMEWALKGMGCNPSVPAVFIGGKFVGSSKDVISLHVDGSLKQLLIDAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0691 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Ssu4g0691 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Ssu4g0691 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Ssu4g0691 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Ssu4g0691 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Ssu4g0691 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Ssu4g0691 102 Pfam Glutaredoxin 14 75 IPR002109 -
Ssu4g0691 102 Gene3D Glutaredoxin 1 100 - -
Ssu4g0691 102 PANTHER GLUTAREDOXIN-C1 PROTEIN 1 101 - -
Ssu4g0691 102 CDD GRX_GRXh_1_2_like 12 93 - -
Ssu4g0691 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0691 Ssu-Chr4 10813688 10813996 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0691 1 102 Miscellaneous Gene Families AT4G15700 49.020 1.06e-35 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0691 K03676 - gmx:100819447 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0691 4 10813688 10813996 Ssu4g0691 4 10813688 10813996 ECH
Ssu4g0691 4 10813688 10813996 Ssu7g2032 7 40396900 40398056 PCT
Ssu7g2033 7 40405564 40405869 Ssu4g0691 4 10813688 10813996 PCT