Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2032 ATGCACATAGGATTGTCGGCCCTTGCCACTGTTTTTGTATTCCATGAATCTGATGCGGGGACCAAAGTGGAAACCAATTGGATAAACACTTATCTCCATATCAGCCTCGCAACCCAGCATCATTCAGAATTCAGAACCAAATACAACATCTTACATAAGAGGAAGCTAAGGGAATTACTTGAAGTAATGGATAGAGTAAGGGACTTGTCATCAAAGAAGGCAGCTGTTATATTCACCAAGAGTTCATGTTACATGTGCCACAGCATCACGCAACTGTTCTATGAGCTTGGAGCAAGTCCTGCAGTGCATGAGCTAGACAAGGATGCCTATGGGAGGGAAATGGAAGTGGGCCTTAAGGAGCATGGGGTGTAA 372 0.4435 MHIGLSALATVFVFHESDAGTKVETNWINTYLHISLATQHHSEFRTKYNILHKRKLRELLEVMDRVRDLSSKKAAVIFTKSSCYMCHSITQLFYELGASPAVHELDKDAYGREMEVGLKEHGV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2032 123 Gene3D Glutaredoxin 51 122 - -
Ssu7g2032 123 PANTHER GLUTAREDOXIN 63 122 IPR011905 -
Ssu7g2032 123 SUPERFAMILY Thioredoxin-like 63 120 IPR036249 -
Ssu7g2032 123 Pfam Glutaredoxin 76 114 IPR002109 -
Ssu7g2032 123 ProSiteProfiles Glutaredoxin domain profile. 63 123 - -
Ssu7g2032 123 PANTHER GLUTAREDOXIN-C1 PROTEIN 63 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2032 Ssu-Chr7 40396900 40398056 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu7g2032 63 122 Miscellaneous Gene Families AT4G15670 41.667 7.00e-14 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2032 K03676 - gmx:100305876 110.538
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2032 7 40396900 40398056 Ssu7g2032 7 40396900 40398056 ECH
Ssu4g0691 4 10813688 10813996 Ssu7g2032 7 40396900 40398056 PCT
Ssu7g2032 7 40396900 40398056 Ssu4g0689 4 10787374 10787682 PCT