Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0689 ATGGACATGATCACAAGCATGGTCGCTGAAAAGCCGGTGGTGATATTCAGCAAGAGCACATGTTGCTTGAGCCACTCCGTGACATCACTGATACGTAGCTTTGGGGCAAACCCCACTGTTCATGAGCTCGATGAAATGGCGAATGGGCAGCAGATTGAAAGGGCATTGCTTCAAATGGGGTGCCAACCGAGTGTTCCTGCTGTGTTTATAGGACAACGATTCATTGGTGGTTCTAAGAAAATCATGAGCCTGCATGTCAGGAATGAATTAATACCACTGCTCAAGAATGCCGGGGCTATATGGATTTGA 309 0.4725 MDMITSMVAEKPVVIFSKSTCCLSHSVTSLIRSFGANPTVHELDEMANGQQIERALLQMGCQPSVPAVFIGQRFIGGSKKIMSLHVRNELIPLLKNAGAIWI 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0689 102 Pfam Glutaredoxin 13 75 IPR002109 -
Ssu4g0689 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Ssu4g0689 102 Gene3D Glutaredoxin 2 101 - -
Ssu4g0689 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Ssu4g0689 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 5 102 IPR011905 -
Ssu4g0689 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Ssu4g0689 102 PANTHER MONOTHIOL GLUTAREDOXIN-S2 PROTEIN 1 101 - -
Ssu4g0689 102 CDD GRX_GRXh_1_2_like 12 93 - -
Ssu4g0689 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Ssu4g0689 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Ssu4g0689 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0689 Ssu-Chr4 10787374 10787682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu4g0689 1 102 Miscellaneous Gene Families AT4G15690 51.961 8.94e-42 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0689 K03676 - gmx:100789514 197.978
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0689 4 10787374 10787682 Ssu4g0689 4 10787374 10787682 ECH
Ssu4g0689 4 10787374 10787682 Ssu7g2031 7 40359242 40359550 PCT
Ssu7g2032 7 40396900 40398056 Ssu4g0689 4 10787374 10787682 PCT