Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1782 ATGGCAGAAATGGAACGCCGGATCCTGGTGGCCGTGGACGAAGGCGAGGAGAGCATGTACGCCCTCTCATGGTGCCTCAAGAACCTTGTTTTCCAAAATTCCAAAGACACCCTTATCCTCCTCTACGTCAAGCCCGCTCGTGCCGTTTATTCTGCCTTCGATGGCACAGgATACATGTTTTCCTCTGACATAATCACAACCATGGAGAGGTATAGCCAACAAGTGGCCGATTGCGTCTTGGAGAAAGCCAAGAAATTGTGTAACGATATCGAGAATGTGGAGACGAAGGTAGGGAATGGCGACCCGAGGGACGTGATATGTGAGATGGCTCAAAAGTTGGGTGCTGATGTCTTAGTCATGGGAAGCCATGGTTATGGTCTCATCAAGAGGGCTTTCCTTGGAAGCGTCAGCAATCACTGTGCACAGAACGTGAAGTGCCCGGTTTTGATTGTGAAGAAGCCAAAACCAACCGCcggaaacatataa 486 0.4877 MAEMERRILVAVDEGEESMYALSWCLKNLVFQNSKDTLILLYVKPARAVYSAFDGTGYMFSSDIITTMERYSQQVADCVLEKAKKLCNDIENVETKVGNGDPRDVICEMAQKLGADVLVMGSHGYGLIKRAFLGSVSNHCAQNVKCPVLIVKKPKPTAGNI 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1782 161 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 3 157 - -
Ssu7g1782 161 Pfam Universal stress protein family 6 152 IPR006016 -
Ssu7g1782 161 PRINTS Universal stress protein signature 5 23 IPR006015 -
Ssu7g1782 161 PRINTS Universal stress protein signature 112 124 IPR006015 -
Ssu7g1782 161 PRINTS Universal stress protein signature 130 152 IPR006015 -
Ssu7g1782 161 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 154 - -
Ssu7g1782 161 Gene3D HUPs 1 159 IPR014729 -
Ssu7g1782 161 CDD USP_Like 7 151 - -
Ssu7g1782 161 PANTHER OS05G0357525 PROTEIN 3 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1782 Ssu-Chr7 36300429 36301322 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1782 - - gmx:100305594 292.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0595 4 9542927 9543687 Ssu7g1782 7 36300429 36301322 ECH
Ssu7g1782 7 36300429 36301322 Ssu7g1782 7 36300429 36301322 ECH
Ssu4g0432 4 7042829 7043745 Ssu7g1782 7 36300429 36301322 PCT