Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0595 ATGGAGAGAAAGATAGTGGTGGCTGTGGATGAGAGCGAGGAGAGCATGTTTGCACTGTCTTGGTGTATCACCAACCTTATTGCCGACACCCCCAACGTTAAACTAGTCCTGCTCTATGTCAAGCCACCTCCTCCTCTCCACTTCCTAAATGCTGCATGGTACATGTTTTCCAGTAAAACTATCTCAGCTATGGAAGAATACGGCAAGGATTTGGCTAATTCAGTAATGGAAAGAGCTGAAGCCATTTGCAAGAACTTGAAGACCGCAAATAGTATCAAAATGGAAAGAGTAGTTGGGTGTGGCGATGCCAAGGATGTGATATGCAGTGCAGTTCAGAAACTTGAAGCTGATACCTTGGTCTTGGGAACTCATGGTTATGGATTCTTTAAGAGGGCGCTTGTTGGAAGTGTCAGTGATTACTGCGTTAAATATGCAAAGTGTGCTGTTGTAATCGTGAAGCAACCATAA 468 0.4423 MERKIVVAVDESEESMFALSWCITNLIADTPNVKLVLLYVKPPPPLHFLNAAWYMFSSKTISAMEEYGKDLANSVMERAEAICKNLKTANSIKMERVVGCGDAKDVICSAVQKLEADTLVLGTHGYGFFKRALVGSVSDYCVKYAKCAVVIVKQP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0595 155 Gene3D HUPs 1 155 IPR014729 -
Ssu4g0595 155 Pfam Universal stress protein family 3 153 IPR006016 -
Ssu4g0595 155 PRINTS Universal stress protein signature 131 153 IPR006015 -
Ssu4g0595 155 PRINTS Universal stress protein signature 113 125 IPR006015 -
Ssu4g0595 155 PRINTS Universal stress protein signature 2 20 IPR006015 -
Ssu4g0595 155 CDD USP_Like 4 152 - -
Ssu4g0595 155 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 154 - -
Ssu4g0595 155 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 3 154 - -
Ssu4g0595 155 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0595 Ssu-Chr4 9542927 9543687 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0595 - - gmx:100810564 251.906
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0595 4 9542927 9543687 Ssu7g1782 7 36300429 36301322 ECH
Ssu4g0595 4 9542927 9543687 Ssu4g0595 4 9542927 9543687 ECH