Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0432 ATGAGTGAAGAAGCAAGAAACGAACGGCGGGTCCTGGTGGCGGTGGACGAAGGCGAGGAGAGCATGTACGCTCTTTCTTGGAGCCTCAAGAACGTAGTTTTCCAAAATTCCAGAGATACCCTTATCCTTCTATACGCCAAGCCCCCTCATGCCGTTTATACCCCCTTAGATGCCACAGGCAGGATAGATGATCCCGAAACTCCAgGATATTTGTTTTCCTCGGACATAAGCGCTGCCATCGAGAAGTATAGCCAAGAAGTGGCCAATTGCGTGTTAGAGAAAGCTAAGAAATTGTGCAAAGATCTCCAAAACGTCAAGTTGGAGACAAGGGTAGAGAGTGGAGACCCGAGGGATGTGATCTGTGAGATGTCTCAAAAGTTGGGCGCTGACTTGCTAGTCATGGGTAGCCACGGCTATGGAGTCGTGAAGAGGGCTTTCCTTGGAAGTGTGAGCAATTACTGCTCACAGAACGTGAAGTGCCCAGTTTTGATAGTCAAGAAGCCAAAACCAACTGCCGGAGCTGGAAAGTGA 531 0.4915 MSEEARNERRVLVAVDEGEESMYALSWSLKNVVFQNSRDTLILLYAKPPHAVYTPLDATGRIDDPETPGYLFSSDISAAIEKYSQEVANCVLEKAKKLCKDLQNVKLETRVESGDPRDVICEMSQKLGADLLVMGSHGYGVVKRAFLGSVSNYCSQNVKCPVLIVKKPKPTAGAGK 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0432 176 CDD USP_Like 10 165 - -
Ssu4g0432 176 Gene3D HUPs 3 174 IPR014729 -
Ssu4g0432 176 PRINTS Universal stress protein signature 8 26 IPR006015 -
Ssu4g0432 176 PRINTS Universal stress protein signature 144 166 IPR006015 -
Ssu4g0432 176 PRINTS Universal stress protein signature 126 138 IPR006015 -
Ssu4g0432 176 Pfam Universal stress protein family 9 166 IPR006016 -
Ssu4g0432 176 Coils Coil 92 112 - -
Ssu4g0432 176 PANTHER OS05G0357525 PROTEIN 4 172 - -
Ssu4g0432 176 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 169 - -
Ssu4g0432 176 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 4 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0432 Ssu-Chr4 7042829 7043745 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0432 - - gmx:100804158 321.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0432 4 7042829 7043745 Ssu4g0432 4 7042829 7043745 ECH
Ssu7g1947 7 38858528 38859314 Ssu4g0432 4 7042829 7043745 ECH
Ssu4g0432 4 7042829 7043745 Ssu7g1782 7 36300429 36301322 PCT