Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3412 ATGGGTGGCCTTGGAACAATGGCAAGACATTTGGACACAATAATAGGGCCTGGAGTGATGCTTCTTTATCCTCTATACGCATCAATGAGGGCGATTGAAAGTCCTTCAACGTTAGATGACCAACAGTGGCTAACGTATTGGGTTTTATACTCCTTCATGGCCCTCTTTGAGCTTTCCACTCATAAGATCCTTTCTTGgTTTCCCATTTGGCCATACCTGAAGCTTCTGTTTTGCGTCTGGCTGGTACTGCCAATGTTCAATGGAGCAGCTTACATATATGAGAATTTTGTGAGGCAATACATCAAGAATATTGGAAGCTATGGAGGTACCAATTATCCTGAGGAGTATAAGAAGGTCCTTCACATGATGACCTTCGATGCAAGGAAAGCAGTTGAACGCTATATCGATAAATATGGCACTGATGCCTTTGAGAGCGTAATCAGAGCCGCCGAAAAAGAAGCAAAGAAGCACTGA 474 0.4325 MGGLGTMARHLDTIIGPGVMLLYPLYASMRAIESPSTLDDQQWLTYWVLYSFMALFELSTHKILSWFPIWPYLKLLFCVWLVLPMFNGAAYIYENFVRQYIKNIGSYGGTNYPEEYKKVLHMMTFDARKAVERYIDKYGTDAFESVIRAAEKEAKKH 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3412 157 PANTHER HVA22-LIKE PROTEIN 5 155 - -
Ssu6g3412 157 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Ssu6g3412 157 PANTHER HVA22-LIKE PROTEINS 5 155 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3412 Ssu-Chr6 76646395 76647537 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3412 K17279 - gmx:100779435 285.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0856 9 37309609 37311918 Ssu6g3412 6 76646395 76647537 PCT
Ssu1g3139 1 82204566 82229064 Ssu6g3412 6 76646395 76647537 PCT