Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g0856 ATGGGCGTCCTTGGAACAATGGCAAGACATTTGGACACAATAGTGGGGCCTGGAGTGGTGCTTCTTTATCCTTTATACGCATCCATAAGGGCAATTGAGAGTCCTTCAACCTTAGATGATCAGCAGTGGCTAACATACTGGGTTTTATACTCCTTCATTACCCTCTTTGAGCTTTCATGTTACAAGATCCTAGCATGGTTTCCAATTTGGCCATACATGAAgcttgtgttttgtctttggctGGTATTGCCAATGTTCAATGGTGCTGCTTACATATATGAGAACTATGTGAGGCAATACTTCAAGAATATAGGAAGCGACCCTGGAAATTCTAAGTATACTGAGGAGCAAAAGAAAGTTCTTCAGATGATGAGTTTTGATGCAAGGAAAGCTGTTGAACGTTATATAGACACATATGGCTCTGAGGCCTTTGAGAGAGTAATCAAAGCAGCTGATAAAGAAGCAAGGAAGCGCTGA 477 0.3983 MGVLGTMARHLDTIVGPGVVLLYPLYASIRAIESPSTLDDQQWLTYWVLYSFITLFELSCYKILAWFPIWPYMKLVFCLWLVLPMFNGAAYIYENYVRQYFKNIGSDPGNSKYTEEQKKVLQMMSFDARKAVERYIDTYGSEAFERVIKAADKEARKR 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g0856 158 Pfam TB2/DP1, HVA22 family 24 100 IPR004345 -
Ssu9g0856 158 PANTHER HVA22-LIKE PROTEIN 3 158 - -
Ssu9g0856 158 PANTHER HVA22-LIKE PROTEINS 3 158 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g0856 Ssu-Chr9 37309609 37311918 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g0856 K17279 - gmx:100819566 300.827
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g0856 9 37309609 37311918 Ssu6g3412 6 76646395 76647537 PCT