Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3095 ATGGTTTCGGTTGATAACGGTAAAGACGAAATTGAGGAATCTAATGGAAGTAAAGTGAAGGAGTTTGCTTCCATAGATATTTCAACTTCTCGAAGAACATTGGTGGGCAACGAAAATCCTCAAAGAAAGTTCCATGGCACCTTGAGTTCTATTCCCAATAGGATCAACTTCTTGAAATTTGGTTCTGCATCTGCCAAATTCAAGCGGCTTGCTACTCAGAAGGACCAGATTTCGCAATCTGTGCCTTCCCCCGGTTCTATTGGATTAAGAATGCGCTTCAGTGGCATGTTTGCTAAGAAACTTGACTGGGCTTCACTCAAGAAGATGTGTGTGGAATGGATTAGGGACCCAATGAACATAGCCCTTTTTGTGTGGATCTTGTGTGTTGCTGTTTCAGGTGCCATTCTGTTCCTTGTCATGACTGGCATGTTGAATGGTGTGCTGCCAAGGAAGTCCCAGAGGAATGCATGGTTTGAAGTAAACAATCAAATACTCAATGCACTGTTCACACTGATGTGCTTGTACCAGCATCCAAAGAGGTGCTACCACCTTGTGCTTCTGTGCAGGTGGAGTCCACAAGATGTCTCAAGACTTAGAAAGGTGTATTGCAAGAATGGGACTTATAAGCCCCATGAGTGGGCGCACATGATGGTAGTGGTCATTCTCCTTCAAGTGAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTGGGGGTATAAAAGATCTGACCGCCCGGCCATAGGAGTTGGAATATGTATAACTTTCGCAATTGGTGCGCCTGCAATCGCTGGTCTGTATGCTATTCTTAGCCCTCTTGGTAAAGATTATGATTCTGAGACGGATGAAGAAGCACAGGTTCAAGTTTCTGTTTCTCAGAAGCAAGAGCAGCTGAGAGTGAAATCACTTGAGAAGAAATATTCATTTGCATCCGGACAGCAACAAAAGGTTATTGAAAATAGACCACAGTGGAGTGGAGGGATACTTGACATTTGGGATGATATTTCTCAAGCATATCTATCACTTTTCTGTATTTTTTGTGTCTTTGGTTGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTCCACATTGCTACTTTTATGCTGTTCTGTATGGCTCCCTTCTGGATTTTTATCTTGGCTGCTGTTAATATTGAGGATGACACTGTTAGGCAGGCTCTAGTGGCTTCTGGGATTATTCTATGTTTTTTTGGCTTACTGTATGGTGGCTTTTGGAGGATCCAAATGAGAAAAAGGTTCAATTTGCCTTCTTATGACTTCTGTTTTGGCAAGCCTTCAGCTTCTGATTGCACACTTTGGCTATGCTGTAGCTGGTGCTCTCTTGCTCAAGAAGTGCGGACGGGGGATACCTATGATATTGTAGAAGATAAATTATGCAGGAAAGAAGTTTATAACAGTGACCAACAACCAATTTCACCTTTGCCTCGTGAAGATGTGGCATCAACCAAATCCGGCACAAGTTCTCCTTTGGGTAACAACTCTTCCCCTTCTATGATCAAGCCATCTAGTCCTCTAAGTTCAGGCAGTTTCTTTAAGGGATATTATAGTCCAGAGAGGCCACTATCTACTGTAAAAGAAGAGCTTCCTGAAAGAGGTAAAGATGCAACAATGAACCCACCAACTCCACCATTAATTCAAAGAGAATCTCCGTAG 1677 0.427 MVSVDNGKDEIEESNGSKVKEFASIDISTSRRTLVGNENPQRKFHGTLSSIPNRINFLKFGSASAKFKRLATQKDQISQSVPSPGSIGLRMRFSGMFAKKLDWASLKKMCVEWIRDPMNIALFVWILCVAVSGAILFLVMTGMLNGVLPRKSQRNAWFEVNNQILNALFTLMCLYQHPKRCYHLVLLCRWSPQDVSRLRKVYCKNGTYKPHEWAHMMVVVILLQVNCFAQYALCGLNWGYKRSDRPAIGVGICITFAIGAPAIAGLYAILSPLGKDYDSETDEEAQVQVSVSQKQEQLRVKSLEKKYSFASGQQQKVIENRPQWSGGILDIWDDISQAYLSLFCIFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVASGIILCFFGLLYGGFWRIQMRKRFNLPSYDFCFGKPSASDCTLWLCCSWCSLAQEVRTGDTYDIVEDKLCRKEVYNSDQQPISPLPREDVASTKSGTSSPLGNNSSPSMIKPSSPLSSGSFFKGYYSPERPLSTVKEELPERGKDATMNPPTPPLIQRESP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3095 558 PANTHER - 11 556 - -
Ssu6g3095 558 Pfam PLAC8 family 324 454 IPR006461 -
Ssu6g3095 558 MobiDBLite consensus disorder prediction 477 558 - -
Ssu6g3095 558 Pfam Protein of unknown function (DUF2985) 112 190 IPR021369 -
Ssu6g3095 558 PANTHER PLAC8 FAMILY PROTEIN-RELATED 11 556 - -
Ssu6g3095 558 MobiDBLite consensus disorder prediction 487 518 - -
Ssu6g3095 558 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 323 455 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3095 Ssu-Chr6 70490248 70491924 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3095 - - gmx:100795088 1023.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g3095 6 70490248 70491924 Ssu4g2463 4 61785741 61787393 ECH
Ssu6g3095 6 70490248 70491924 Ssu6g3095 6 70490248 70491924 ECH
Ssu9g1652 9 53342090 53343820 Ssu6g3095 6 70490248 70491924 PCT