Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1652 ATGGTTTCAGTTGATAACGGGATTGGGAATCCCAAAGATGAAATCGAGGAATCTAATGGTAGTAAAGTGAAGGAGTATGCGTCTATAGATATTTCAACTTCTCAGAAAACATTTCTGGGCAGTGAAGATCCTCAGAGAAAGCTTCAGGGCACCTTAAGTTCTTCTGTTCCTAATaggaaaaaatttcttaaatttggtTCTGCATCTGCCAAATTCAAGCGGCTTGCTACTGAGAGAGACCAGGTTTCACTATCTGTGCCTTCTCCTCGTTCAAAGAGCCTAAGAGCACGTTTCAGTGGCATGTTTGCTCAGAAACTTGATGGGGGCTCAGTGAAGAAAATGTGCATGGAATGGATTAGAAGTCCAGTGAACATGGCCCTTTTTGTGTGGATCATCTGTGTTGCTGTTTCGGGTGCAATTCTGTTCCTTGTCATGACAGGTATGTTGAATGGTGTGTTACCAAGAAAGTCTCAGAGAAACGCTTGGTTTGAAATAAACAACCAAATTCTCAACGCACTGTTTACACTCATGTGTTTGTACCAACACCCTAAGAGGTTCTACCACCTTGTTCTTCTGTGCAGATGGACACCAAATGACATCTCTAAACTTAGAAAGGTATACTGCAAGAATGGCACTTACAAGCCCCATGAGTGGGCACATATGATGGTGGTGGTCATTCTCCTTCATGTTAACTGTTTTGCTCAATATGCACTTTGTGGTCTAAACTTGGGGTATACAAGGTCTGAGAGACCTGCCATTGGAGTTGGAATAAGTATATCTTTTGCAATTGCTGCTCCTGCAGTTGCTGGCTTGTACACCATTGTTAGCCCACTTGGGAAGGACTATGATTGTGGGATGGATGAAGAAGCACAGGTTCAAGTTACTGCTTCTCAAAGGCAAGAGCAGCTTAGAGAGAAACCATTTGAGAAGAAATATTCATTTGCATCCAAAGATCAACAAAGTGTTGTTGAAAATAGACTAAAGTGGAGTGGAGGAATACTTGACATTTGGAATGATATTTCTTTAGCATATCTCTCACTTTTCTGCACCTTTTGTGTGTTTGGGTGGAATATGGAGAGACTTGGCTTTGGAAACATGTATGTTCATATTGCCACCTTCATGCTGTTTTGTATGGCTCCTTTCTGGATTTTTCTTTTGGCTTCCGTTAACATAGATGATGACAATGTTAGGCAGGCTCTAGTTGCTGTTGGAattgttctttgttttcttgGTTTACTTTATGGTGGCTTTTGGAGGATCCAAATGAGAAAGAGGTTCAATTTACCTGCCTATGACTTCTGTTTTGGCAAACCTTCAGCTTCTGATTGCGCACTTTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGCACGGACTGGGAACAACTATGAccttgaagaagaaaaattctCTAGGAAAGAAATTGATACTAGTGGCCAACTTTCAATTTCACCTTTGGCTCGGGAAGATGTAGCATCAACCAAATCTGGCACAAGTTCTCCTCTGGGTAGCAACTCTTCCCCTTATATGATGAATACATCTAGTCCTCCAAATTCAAGCAATGTCTATTACAGTCCAGATAGGCTACTATCTACAATAAAGGAAGAGAATTGTTTAAGAGGTAAAGATGGAATAATGCACCCACCGGCTCCCTCATTAATACAAAGAGAAGCTCCTCAGTCCCTGAATGGAAAAGGGAGAAACGATCCTTTTCCTTTTGCTACTTAa 1731 0.4044 MVSVDNGIGNPKDEIEESNGSKVKEYASIDISTSQKTFLGSEDPQRKLQGTLSSSVPNRKKFLKFGSASAKFKRLATERDQVSLSVPSPRSKSLRARFSGMFAQKLDGGSVKKMCMEWIRSPVNMALFVWIICVAVSGAILFLVMTGMLNGVLPRKSQRNAWFEINNQILNALFTLMCLYQHPKRFYHLVLLCRWTPNDISKLRKVYCKNGTYKPHEWAHMMVVVILLHVNCFAQYALCGLNLGYTRSERPAIGVGISISFAIAAPAVAGLYTIVSPLGKDYDCGMDEEAQVQVTASQRQEQLREKPFEKKYSFASKDQQSVVENRLKWSGGILDIWNDISLAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFLLASVNIDDDNVRQALVAVGIVLCFLGLLYGGFWRIQMRKRFNLPAYDFCFGKPSASDCALWLCCCWCSLAQEARTGNNYDLEEEKFSRKEIDTSGQLSISPLAREDVASTKSGTSSPLGSNSSPYMMNTSSPPNSSNVYYSPDRLLSTIKEENCLRGKDGIMHPPAPSLIQREAPQSLNGKGRNDPFPFAT 576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1652 576 PANTHER PLAC8 FAMILY PROTEIN-RELATED 16 560 - -
Ssu9g1652 576 Pfam Protein of unknown function (DUF2985) 117 195 IPR021369 -
Ssu9g1652 576 PANTHER - 16 560 - -
Ssu9g1652 576 MobiDBLite consensus disorder prediction 1 21 - -
Ssu9g1652 576 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 328 460 IPR006461 -
Ssu9g1652 576 Pfam PLAC8 family 329 459 IPR006461 -
Ssu9g1652 576 MobiDBLite consensus disorder prediction 491 522 - -
Ssu9g1652 576 MobiDBLite consensus disorder prediction 542 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1652 Ssu-Chr9 53342090 53343820 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1652 - - gmx:100811964 953.355
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1652 9 53342090 53343820 Ssu6g3095 6 70490248 70491924 PCT