Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g3037 ATGTCGAAGCAGAACCGAAGCAACACCGTGGCGTCGAAGCAGACATACAGCGTGTGCTTCTGCTGGCGGCGGCGTTTCAAGCTGGCCCTGGCGGAGGCGCCGCCGGAAATCAAGGCCCTCTTCGAGCAGTACTCCGAGAATGAGGTCATGACGCCTTCTCATCTTCGAAGGTTCCTTGTTGAGGTGCAGAGGCAAGAGAAGGCCACCGAGGAAGACGCGCAAGCCATCATCGATCGCTTCAGGCATTTCCATCGCAGAGGCGCTGGCCTCAATCTCGAAGCTTTCTTCAAGCATCTCTTCAGCGACGATAACTCTCCTCTCCTTCATTCTCATGAGGTGCAGCATGATATGAATTTACCCTTGTcacattatttcatatatactGGCCATAATTCCTATTTAACTGGGAATCAGCTGAGCAGCGACTGCAGTGACGTCCCCATCATAAATGCACTGAAGAGAGGTGTGAGGGTGATTGAATTGGACATATGGCCTAATGCTTCAAAGGATAATATCGATGTTCTTCATGGAAGgACATTGACTACTCCTGTAGAGCTCGTCAGATGTTTGAGCTCTATTAAGGAACATGCCTTTGTGGCATCAGAATATCCAGTTGTAATAACCCTAGAAGACCACCTTACACCAGATCTTCAGGCTAGAGTGGCTGAGATGGTTACTCAAATATTTGGAGACGTACTATTTACTCCTAACCCAGAAAGCGTGAAGGAATTCCCTTCTCCTGAATCACTTAAAAAGAGGATTATTATATCAACCAAACCCCCTAAGGAGTACCTTGAAAAGGACAAAGGGGATGACTCACAGCACGAAAAGGAAAAAGGGGATAATTCACAGCACAAAAAGGCATCAGGTGAAGATGAAGCATGGGGGAAGGAAGTTCCAAGCTTGAAAGGTGGTACTATGGCTGATTACAAGGACAACAATGCAGATGAAGATCTTAATGATGAGGAAGAATTTGATGAATTGGACAAGCCGCATCAAAATGAACCTCCAGAATATAGACGCCTAATTGCCATTCATGCTGGGAAGCCTAAAGGAGGATTAGAGGAATGCCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAGCAACAGCTTGAAAAGGCTGCTATAAATCATGGAAAACAAATTGTCAGGTTTACTCAGCGGAATATATTGAGGGTGTATCCCAAAGGTACTCGCATTGACTCATCAAATTATAACCCATTAATTGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGTAGATCACTTTGGTTGATGCATGGAATGTTCAGAGCCAATGGAGGGTGTGGTTATGTTAAAAAACCAGAATTTCTGTTAAGGACTGACGAGATCTTTGATCCTAAAGCTAAGTTACCTGTGAAGAAAACTTTGAAGGTGACTGTTTATATGGGGGAAGGATGGTATTATGATTTCAAGCATACACACTTTGATCAATACTCACCTCCAGACTTCTACACAAGAGTTGGGATTGCTGGAGTTCCCAATGATACTATAATGAAGAGAACTAGGGCAATAGAGGATAACTGGTTACCTACATGGAATGAAGTATTCGAGTTCCCTCTTACTGTTCCAGAGTTGGCCTTGCTTCGCATAGAAGTTCATGAGTATGACATGTCTGAGAAAGATGACTTTGGTGGACAAACATGCCTACCTATCTGGGAGCTAAGAAGTGGCATTCGAGCAATTCCACTGCATAGCCAAAAGGGAGATAAATACAACTCTGTAAAGCTTCTCATGCGCTTTGAATTTATTTGA 1806 0.438 MSKQNRSNTVASKQTYSVCFCWRRRFKLALAEAPPEIKALFEQYSENEVMTPSHLRRFLVEVQRQEKATEEDAQAIIDRFRHFHRRGAGLNLEAFFKHLFSDDNSPLLHSHEVQHDMNLPLSHYFIYTGHNSYLTGNQLSSDCSDVPIINALKRGVRVIELDIWPNASKDNIDVLHGRTLTTPVELVRCLSSIKEHAFVASEYPVVITLEDHLTPDLQARVAEMVTQIFGDVLFTPNPESVKEFPSPESLKKRIIISTKPPKEYLEKDKGDDSQHEKEKGDNSQHKKASGEDEAWGKEVPSLKGGTMADYKDNNADEDLNDEEEFDELDKPHQNEPPEYRRLIAIHAGKPKGGLEECLKVDPDKVRRLSLSEQQLEKAAINHGKQIVRFTQRNILRVYPKGTRIDSSNYNPLIGWMHGAQMVAFNMQGYGRSLWLMHGMFRANGGCGYVKKPEFLLRTDEIFDPKAKLPVKKTLKVTVYMGEGWYYDFKHTHFDQYSPPDFYTRVGIAGVPNDTIMKRTRAIEDNWLPTWNEVFEFPLTVPELALLRIEVHEYDMSEKDDFGGQTCLPIWELRSGIRAIPLHSQKGDKYNSVKLLMRFEFI 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g3037 601 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 12 601 - -
Ssu6g3037 601 Pfam Phosphoinositide-specific phospholipase C, efhand-like 36 103 IPR015359 -
Ssu6g3037 601 SUPERFAMILY PLC-like phosphodiesterases 115 457 IPR017946 GO:0006629|GO:0008081
Ssu6g3037 601 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 473 600 IPR035892 -
Ssu6g3037 601 Pfam Phosphatidylinositol-specific phospholipase C, X domain 117 259 IPR000909 -
Ssu6g3037 601 MobiDBLite consensus disorder prediction 252 298 - -
Ssu6g3037 601 CDD C2_PLC_like 471 600 - -
Ssu6g3037 601 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 368 454 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu6g3037 601 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 12 601 IPR001192 GO:0035556
Ssu6g3037 601 Gene3D - 31 111 - -
Ssu6g3037 601 SMART plcy_3 339 456 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu6g3037 601 MobiDBLite consensus disorder prediction 252 317 - -
Ssu6g3037 601 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 115 259 - -
Ssu6g3037 601 Gene3D C2 domain 468 601 IPR035892 -
Ssu6g3037 601 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 369 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu6g3037 601 SMART plcx_3 115 259 IPR000909 -
Ssu6g3037 601 SMART C2_3c 473 581 IPR000008 -
Ssu6g3037 601 Gene3D Phosphatidylinositol (PI) phosphodiesterase 112 467 IPR017946 GO:0006629|GO:0008081
Ssu6g3037 601 SUPERFAMILY EF-hand 26 111 IPR011992 -
Ssu6g3037 601 Pfam C2 domain 474 574 IPR000008 -
Ssu6g3037 601 PRINTS Phospholipase C signature 415 433 IPR001192 GO:0035556
Ssu6g3037 601 PRINTS Phospholipase C signature 146 166 IPR001192 GO:0035556
Ssu6g3037 601 PRINTS Phospholipase C signature 243 260 IPR001192 GO:0035556
Ssu6g3037 601 PRINTS Phospholipase C signature 120 138 IPR001192 GO:0035556
Ssu6g3037 601 PRINTS Phospholipase C signature 394 415 IPR001192 GO:0035556
Ssu6g3037 601 PRINTS Phospholipase C signature 567 577 IPR001192 GO:0035556
Ssu6g3037 601 ProSiteProfiles C2 domain profile. 452 583 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g3037 Ssu-Chr6 69554415 69559137 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g3037 12 601 Acyl Lipid Metabolism Gene Families AT3G55940 67.731 0.0 823
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g3037 K05857 - gmx:100037460 1103.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2642 6 61581427 61593537 Ssu6g3037 6 69554415 69559137 ECH
Ssu6g3037 6 69554415 69559137 Ssu6g3037 6 69554415 69559137 ECH
Ssu9g1594 9 52269035 52273530 Ssu6g3037 6 69554415 69559137 PCT