Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1594 ATGTCCAAACAGACTTACAACGTTTGCTTTTGCTTCCGCCGGCGCTTCAGGCTCCCAGTGTCGGAGGCCCCGCCGGAGATAAGGACCCTTTTCGACCTTTACTCCGATGAGAATGGCGTCATGACAGCTTCTCACCTACTACGTCTCCTGGTTGAGGTGCAGAGGGAAGAGAATACCACTGAGGAGGAAGCACAAGCTATCATCGATGGCCACAAGCATCTCAGTATCTTTCACCGAAGGGGTCTCAATCTCGAAAGCTTCTTCAACTATCTTTTCAGTCACAACAATAACCCACCTCTGTCACCTTCTCTTGGGGTGCACCAAGATATGTCTTCACCGTTGTCTCACTACTTCACTTATACTGGTCATAATTCCTATCTAACTGGGAACCAGCTTAGCAGTGACTGCAGTGACGTCCCCATCATCAATGCATTGCTGAAAGGTGTAAGGGTGATTGAATTAGATATATGGCCTAATGCATCAAAGGATGATGTGGATGTTCTTCATGGAAGGACTTTGACATCTCCTGTGGCGCTCATCAAATGTTTGGGGTCTATTAAGCAGTATGCCTTTGTTGTCTCAGAATATCCAGTTGTAATAACCTTAGAAGACCACCTTACTCCCGATCTTCAGGCCAAAGTGGCTGAGATGGTTACTCAAACATTTGGAGACATACTATTTTCTCCTAGCTCAGAAAGCTTGAAGGAATTTCCTTCTCCTGAATCACTTAAAAGGAGGATTATCATATCAACCAAACCACCTAAGGAGTACCTTGAGGCAAAAGAAGTGCAGGAAAAGGAGGAGGAATCACAGAAGGGAAAGCCTGCAGGTGATGAAGAAGCATGGGGGAAGGAAGTCCCTAGTTTGAGAGGTGGCACTATCTCTGATTACAAGAACATTGGGGATGAAGATGATCTTGGTGATGCGGAAGATCTTGAAGAAGCAGAAAGGTCACGTCAAAATGCATCAGACGAATACAGACGTTTAATTGCCATTCATGCTGGGAAGCCTAAAGGTGGGTTAGAGGAATGTCTCAAAGTGGATCCTGATAAAGTGAGACGTCTAAGTTTAAGTGAACTACAGCTTGAAAAGGCAGCTGAAACTCATGGGAAAGACATTGTCAGGTTCACTCAGCGGAATATACTGAGAGTGTATCCAAGAGGTACTCGCATTACCTCGACAAATTATAACCCATTGATCGGGTGGATGCATGGAGCTCAGATGGTTGCATTTAACATGCAGGGGTATGGTAGATCTCTTTGGTTGATGCAGGGAATGTTCAAAGCCAATGGCGGATGCGGTTATGTTAAAAAACCAGATTTTCTATTAAAGGGTGGTCCAAATAATGAGGTCTTTGATCCTAAAGCTCATTTGCCTGTGAAGACTACTTTGAAGGTGACGATATATATGGGGGAAGGATGGTTTCATGATTTCAAGCACACGCACTTTGATCAATTCTCACCCCCGGACTTCTACGCAAGAGTGGGGATTGCTGGAGTCCCTTATGATACTGTTATGAAAAAAACTAAGAGTATAGAGGATAGTTGGTTGCCTTCATGGAATGAGGTATTCGAGTTCCCACTTGCTGTTCCTGAACTGGCTCTGCTTCGCGTAGAAGTGCATGAGTATGACATGTCTGAGAAGGATGACTTTGGTGGTCAAACGTGCTTACCTGTTTGGGAACTACGAAGTGGAATTCGAGCAGTTCCACTGTATTCCCGCAACGGAGATCAGTATAACAATGTGAAGCTTCTCATGCGCTTTGAATTCATTTGA 1776 0.4471 MSKQTYNVCFCFRRRFRLPVSEAPPEIRTLFDLYSDENGVMTASHLLRLLVEVQREENTTEEEAQAIIDGHKHLSIFHRRGLNLESFFNYLFSHNNNPPLSPSLGVHQDMSSPLSHYFTYTGHNSYLTGNQLSSDCSDVPIINALLKGVRVIELDIWPNASKDDVDVLHGRTLTSPVALIKCLGSIKQYAFVVSEYPVVITLEDHLTPDLQAKVAEMVTQTFGDILFSPSSESLKEFPSPESLKRRIIISTKPPKEYLEAKEVQEKEEESQKGKPAGDEEAWGKEVPSLRGGTISDYKNIGDEDDLGDAEDLEEAERSRQNASDEYRRLIAIHAGKPKGGLEECLKVDPDKVRRLSLSELQLEKAAETHGKDIVRFTQRNILRVYPRGTRITSTNYNPLIGWMHGAQMVAFNMQGYGRSLWLMQGMFKANGGCGYVKKPDFLLKGGPNNEVFDPKAHLPVKTTLKVTIYMGEGWFHDFKHTHFDQFSPPDFYARVGIAGVPYDTVMKKTKSIEDSWLPSWNEVFEFPLAVPELALLRVEVHEYDMSEKDDFGGQTCLPVWELRSGIRAVPLYSRNGDQYNNVKLLMRFEFI 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1594 591 PANTHER PHOSPHOINOSITIDE PHOSPHOLIPASE C 2 591 - -
Ssu9g1594 591 CDD C2_PLC_like 461 590 - -
Ssu9g1594 591 Pfam C2 domain 463 565 IPR000008 -
Ssu9g1594 591 CDD PI-PLCc_plant 107 430 - -
Ssu9g1594 591 PRINTS Phospholipase C signature 557 567 IPR001192 GO:0035556
Ssu9g1594 591 PRINTS Phospholipase C signature 113 131 IPR001192 GO:0035556
Ssu9g1594 591 PRINTS Phospholipase C signature 139 159 IPR001192 GO:0035556
Ssu9g1594 591 PRINTS Phospholipase C signature 236 253 IPR001192 GO:0035556
Ssu9g1594 591 PRINTS Phospholipase C signature 381 402 IPR001192 GO:0035556
Ssu9g1594 591 PRINTS Phospholipase C signature 402 420 IPR001192 GO:0035556
Ssu9g1594 591 ProSiteProfiles C2 domain profile. 443 573 IPR000008 -
Ssu9g1594 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 108 252 - -
Ssu9g1594 591 Gene3D Phosphatidylinositol (PI) phosphodiesterase 105 456 IPR017946 GO:0006629|GO:0008081
Ssu9g1594 591 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 2 591 IPR001192 GO:0035556
Ssu9g1594 591 Gene3D - 22 98 - -
Ssu9g1594 591 SUPERFAMILY EF-hand 12 110 IPR011992 -
Ssu9g1594 591 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 355 441 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1594 591 Pfam Phosphatidylinositol-specific phospholipase C, X domain 110 252 IPR000909 -
Ssu9g1594 591 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 463 590 IPR035892 -
Ssu9g1594 591 SUPERFAMILY PLC-like phosphodiesterases 108 444 IPR017946 GO:0006629|GO:0008081
Ssu9g1594 591 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 356 442 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1594 591 MobiDBLite consensus disorder prediction 258 320 - -
Ssu9g1594 591 SMART plcx_3 108 252 IPR000909 -
Ssu9g1594 591 SMART C2_3c 463 571 IPR000008 -
Ssu9g1594 591 SMART plcy_3 326 443 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Ssu9g1594 591 Pfam Phosphoinositide-specific phospholipase C, efhand-like 26 95 IPR015359 -
Ssu9g1594 591 Coils Coil 312 332 - -
Ssu9g1594 591 MobiDBLite consensus disorder prediction 258 285 - -
Ssu9g1594 591 Gene3D C2 domain 458 591 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1594 Ssu-Chr9 52269035 52273530 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1594 1 591 Acyl Lipid Metabolism Gene Families AT3G55940 68.456 0.0 825
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1594 K05857 - gmx:100784534 1065.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1594 9 52269035 52273530 Ssu6g3037 6 69554415 69559137 PCT