Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2994 ATGAAGGGTTCGAGCCGTTTCTTCACGGTGGGGCTGGTGTCGGCGTGGTACGCCTCCAACATTGGGGTGCTCCTGCTGAACAAGTACCTGCTCAGCAACTACGGCTTCAAGTACCCCATATTCCTCACCATGTGCCACATGACCGCGTGCTCCCTCTTCAGCTACGTCGCCATCGCGTGGCTCAAGATGGTCCCCATGCAGACCGTACGCTCCAGGCTCCAGTTCCTCAAGATCGCCGCGCTCAGCCTCGTCTTCTGCGTCTCCGTCGTCTTCGGCAACGTCTCGCTCCGCTACCTTCCAGTCTCGTTCAACCAGGCCGTCGGCGCCACCACGCCCTTCTTCACCGCCGTCTTCGCCTACCTCATGACCTTCAAGAGGGAGGCCTGGCTCACGTACCTCACCCTCGTCCCCGTCGTCACCGGCGTCGTCATTGCCAGCGGGGGTGAACCTAGCTTCCATTTATTTGGGTTCATAGTATGCGTTGCAGCTACAGCTGCACGAGCCTTGAAATCCGTGTTACAAGGGATTTTGCTTTCTTCTGAAGGAGAGAAGTTGAATTCTATGAACCTTCTTCTTTACATGGCTCCAATGGCTGTTGTTTTCCTTCTTCCTGCTACACTtataatggaagaaaatgtgGTTGGTATTACATTGGCTCTTGCCAGAGATGATGTGAAGATCATTTGGTATCTGCTATTTAATTCAGCACTTGCTTATTTTGTCAACCTGACCAATTTCTTGGTCACCAAACATACCAGTGCTCTTACCCTTCAGGTACTTGGGAATGCTAAAGGGGCTGTAGCAGTAGTAGTTTCAATTCTGATATTTAGAAACCCAGTGTCAGTCACTGGAATGATGGGTTATTCACTCACAGTCATTGGAGTTGTACTTTATAGTGAAGCCAAAAAGCGAAGTAAGTGA 921 0.5016 MKGSSRFFTVGLVSAWYASNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLFSYVAIAWLKMVPMQTVRSRLQFLKIAALSLVFCVSVVFGNVSLRYLPVSFNQAVGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVVIASGGEPSFHLFGFIVCVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEENVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGMMGYSLTVIGVVLYSEAKKRSK 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2994 306 Pfam Triose-phosphate Transporter family 12 299 IPR004853 -
Ssu6g2994 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 148 - -
Ssu6g2994 306 SUPERFAMILY Multidrug resistance efflux transporter EmrE 197 300 - -
Ssu6g2994 306 PANTHER - 1 305 - -
Ssu6g2994 306 PANTHER SOLUTE CARRIER FAMILY 35 1 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2994 Ssu-Chr6 68771597 68774913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu6g2994 1 306 Organic Solute Cotransporters AT3G11320 90.196 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2994 - - gmx:100806704 582.022
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1160 9 43808627 43811809 Ssu6g2994 6 68771597 68774913 ECH
Ssu6g2994 6 68771597 68774913 Ssu6g2994 6 68771597 68774913 ECH
Ssu9g1553 9 51638442 51645641 Ssu6g2994 6 68771597 68774913 PCT