Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1160 ATGAAGGTTTCAATCTCCGGAAAGCTCTTCACAGTGGGGTTGATAAGTTTCTGGTACGCCTCCAACATAGGAGTGTTGTTGTTGAACAAGTACCTTCTGAGCAATCACGGTTTCAGGTTCCCCATATTCCTGACGCTGTGCCACATGATGGCATGCTCCATCCTGAGCTACGTTGCCATTGCATGGCTCAAGATGGTGCCCATGCAAACGGTGCGGTCAAGGGTGCAGTTTGTGAAGATATCATCGCTGGGACTCATATTCTGCTTGTCCGTGGTGGGGGGCAACATCTCCCTCCGCTACCTCCCCGTCTCGTTCAACCAGGCCGTCGGCGCCACCACGCCGTTCTTCACGGCGGTGTTTGCTTATTTGATGACCCTCAAGAGGGAGGGTTTGCTCACATACGTCACACTCATCCCGGTTGTTTCCGGCGTTATTATTGCTAGTGGGGTATCACTTCTCTCTCGTGCTACAGCTGCCAGGGCACTCAAAACAGTGCTTCAAGGGGTCTTGCTGTCTTCTGAAGCGGAAAAGCTCAATTCCATGAACCTTCTTATGTACATGGCACCAGTGGCTGTAGCATTCCTTCTTCCAGCTTCACTCATAATGGAGGAAGATGTAATTGGAATCACAATTTCACTTGCTAGAGAGGATTCAAGTATTTTATGGTTACTTCTCTTCAATTCTGCATTGGCATATTTTGTCAATTTGACCAATTTCTTAGTCACAAAGCACACCAGTGCATTAACACTCCAGGTACTAGGAAATGCAAAGGGAGCTGTGGCAGTCGTTATCTCCATTTTGATATTTCAGAATCCTGTATCAGTGACTGGGATGTTTGGATATTCTCTCACAGTCACTGGAGTTATCCTATATAGTGAAGCCAAGAAACGGGGTAAATGA 900 0.4733 MKVSISGKLFTVGLISFWYASNIGVLLLNKYLLSNHGFRFPIFLTLCHMMACSILSYVAIAWLKMVPMQTVRSRVQFVKISSLGLIFCLSVVGGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTLKREGLLTYVTLIPVVSGVIIASGVSLLSRATAARALKTVLQGVLLSSEAEKLNSMNLLMYMAPVAVAFLLPASLIMEEDVIGITISLAREDSSILWLLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPVSVTGMFGYSLTVTGVILYSEAKKRGK 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1160 299 PANTHER - 2 297 - -
Ssu9g1160 299 PANTHER SOLUTE CARRIER FAMILY 35 2 297 - -
Ssu9g1160 299 Pfam Triose-phosphate Transporter family 14 292 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1160 Ssu-Chr9 43808627 43811809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1160 1 299 Organic Solute Cotransporters AT3G11320 76.623 1.13e-175 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1160 - - gmx:100803533 528.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1160 9 43808627 43811809 Ssu9g1160 9 43808627 43811809 ECH
Ssu9g1160 9 43808627 43811809 Ssu6g2994 6 68771597 68774913 ECH