Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu9g1553 ATGGCTCAAATTGCGCTTATTGCTCCAGCAACTGTTATACCTATTACTGGTAGGGGGAAACAACTCTCTGTTGTAAGAAACAAAGTGAGCTTACCATCAGTCCTTCCAAGTTGGAGGATCGAAAGGGTTCCATGGATTGCTGCATCAAATTCACGCGGTGATAGAAGTGGCGTGGTGAAGGTATCTGAAGGAGGAGCCATTTCTCTCACGCGTGGTTGGCCAGCGGAAAAGGGTTCCGAGGATCAGATGGAAGGCTCGAAAATGAAGGGTTCGAACCGGTTCTTCACGGTGGGGTTGGTGGCGTCGTGGTACTCCTCCAACATTGGGGTGCTCCTGTTGAACAAGTACTTGCTGAGCAACTACGGGTTCAAGTACCCGATCTTTCTGACCATGTGCCACATGACGGCGTGTTCCTTGCTCAGTTATGTCGCCATAGCGTGGCTGAAGGTGGTGCCGCTGCAAACGATCCGATCCAGGGTGCAGTTCTTCAAGATCTCCGCTCTCAGCCTCGTTTTCTGCGTCTCCGTTGTGTTCGGGAACATTTCGCTGCGCTACCTCCCCGTGTCGTTCAACCAGGCCGTTGGCGCCACCACGCCCTTCTTCACCGCCGTTTTCGCTTACCTCATGACGTTCAAGAGGGAGGCGTGGCTCACGTACCTCACCCTCGTTCCTGTCGTTACCGGGGTCATCATTGCCAGCGGGGGGGAACCGAGTTTCCATCTATTTGGATTTCTTATATGTGTTGCGGCTACAGCGGCAAGGGCTCTGAAGTCAGTGCTACAAGGAATTTTGCTTTCTTCTGAAGGAGAGAAGCTGAATTCTATGAACCTTCTACTTTACATGGCTCCAATGGCTGTGGTCTTCCTACTTCCTGCAACGCTTATAATGGAAGATAATGTGGTCGGCATCACATTGGCTCTTGCCAGAGATGATGTCAAGATCATTTGGTATCTGCTATTTAATTCGGCACTTGCATATTTTGTCAACCTGACCAACTTTTTGGTCACGAAACATACCAGTGCTCTCACCCTTCAGGTAAGTCACGACCCGATTTTTCAATTTGCATTCCAGTGTTCTTTGTTTTCTAAATGTACTTTTCACTCCAACCAACTCTCTGTTGTCTCATCTATTGGTAGTTGGGACATCAGATTTTGGTGGTTGCCAAATGAGTTATCAAATCACGAGATATGTATCACATTATCGGCATAG 1209 0.488 MAQIALIAPATVIPITGRGKQLSVVRNKVSLPSVLPSWRIERVPWIAASNSRGDRSGVVKVSEGGAISLTRGWPAEKGSEDQMEGSKMKGSNRFFTVGLVASWYSSNIGVLLLNKYLLSNYGFKYPIFLTMCHMTACSLLSYVAIAWLKVVPLQTIRSRVQFFKISALSLVFCVSVVFGNISLRYLPVSFNQAVGATTPFFTAVFAYLMTFKREAWLTYLTLVPVVTGVIIASGGEPSFHLFGFLICVAATAARALKSVLQGILLSSEGEKLNSMNLLLYMAPMAVVFLLPATLIMEDNVVGITLALARDDVKIIWYLLFNSALAYFVNLTNFLVTKHTSALTLQVSHDPIFQFAFQCSLFSKCTFHSNQLSVVSSIGSWDIRFWWLPNELSNHEICITLSA 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu9g1553 402 PANTHER - 48 350 - -
Ssu9g1553 402 PANTHER SOLUTE CARRIER FAMILY 35 48 350 - -
Ssu9g1553 402 Pfam Triose-phosphate Transporter family 99 347 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu9g1553 Ssu-Chr9 51638442 51645641 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Ssu9g1553 87 346 Organic Solute Cotransporters AT3G11320 90.000 3.22e-173 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu9g1553 - - vra:106757848 562.377
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu9g1553 9 51638442 51645641 Ssu6g2994 6 68771597 68774913 PCT