Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g2688 ATGCTCCTGGGAAGTTCTTCATCCATCTCTGCCTCGCTCTCAGATAGAGCGAAGCTTCTCCCTTCTCTGTTTTCCTCTGCACCCATTTTCAATTCTCTGAATGGTTTTTCTGGTGTGAGATTCTCCAAGAGAAATGTGGGTTGTGGGGTTGTGGCTAAGGCCTCCAAGGAGGCTAAGAGCCAACCCTTTTTGGATATAGCGTTTGAGCCTTTTGAGGAAGTGAAAAAAGAGCTTCTTGTCATTCCCACAGTGCCCCATGCATCACTGGCTCGCCAAAAGTACGATGATCAGTGTGAGGCTGCACTCAATGCACAGATCAATGTGGAATACAATGTCTCCTACGTGTATCATGCCATGTATGCGTACTTCGACAGAGACAATGTTGCTCTGAAGGGATTGGCCAAATTTTTCAAGGAATCAAGTATGGAGGAAAGACAGCATGCTGAGATGATGATGGAGTATCAGAATAAAAGAGGAGGTAGGGTTCAGCTGCAATCAATGCTGATGCCATTTTCAGAGTTTGATAACACAGAAAAGGGTGATGCATTATATGCAATGGAACTTGCTTTGTCTTTGGAAAGGCTGAATAATGAGAAGCTTCTAAATTTACACAGCTTAGCAAATGAAAACAATGATGTgcaatttgttgattttattgaaAGCGAGTTTTTGGTCGGTCAGGTGGAAGACATTAAAAAGATCTCAGAATATGTGGCTCAGTTAAGAAGGGTGGGCAAAGGACACGGCGTTTGGCACTTCGATCAGATGCTCCTTAATGGATGTGTGGCTGCGTGA 795 0.4314 MLLGSSSSISASLSDRAKLLPSLFSSAPIFNSLNGFSGVRFSKRNVGCGVVAKASKEAKSQPFLDIAFEPFEEVKKELLVIPTVPHASLARQKYDDQCEAALNAQINVEYNVSYVYHAMYAYFDRDNVALKGLAKFFKESSMEERQHAEMMMEYQNKRGGRVQLQSMLMPFSEFDNTEKGDALYAMELALSLERLNNEKLLNLHSLANENNDVQFVDFIESEFLVGQVEDIKKISEYVAQLRRVGKGHGVWHFDQMLLNGCVAA 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g2688 264 SUPERFAMILY Ferritin-like 85 259 IPR009078 -
Ssu6g2688 264 PANTHER FERRITIN-2, CHLOROPLASTIC-LIKE 10 259 - -
Ssu6g2688 264 Pfam Ferritin-like domain 100 244 IPR008331 GO:0008199
Ssu6g2688 264 Gene3D - 61 259 IPR012347 -
Ssu6g2688 264 ProSitePatterns Ferritin iron-binding regions signature 2. 212 232 IPR014034 -
Ssu6g2688 264 CDD Euk_Ferritin 95 255 - -
Ssu6g2688 264 ProSiteProfiles Ferritin-like diiron domain profile. 92 245 IPR009040 -
Ssu6g2688 264 PANTHER FERRITIN 10 259 IPR001519 GO:0006826|GO:0006879|GO:0008199
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g2688 Ssu-Chr6 62487329 62489657 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g2688 K00522 - gmx:100781581 461.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2688 6 62487329 62489657 Ssu6g2688 6 62487329 62489657 ECH
Ssu3g1057 3 24766718 24769363 Ssu6g2688 6 62487329 62489657 ECH
Ssu4g2422 4 60438472 60507079 Ssu6g2688 6 62487329 62489657 ECH