Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu6g1387 ATGAGGTTTGTAACAGGTTCTCCGAAAGGCACGTGGGAACCCATCATGACTGCGGATACAACCACACAGAGTTACTGGCTAAATTGGAGGGTTTTGGTTTGTGCCATTTGGGTTCTGCTTTCAGCTATCTGTTCGTTATTGCTTATATGGAAGTATGAAGCTTCACGGAGGCCACCGACAAATGATAACAAGGAGAGCCAGAAAGAAACGTCGTCGACTTTGTACGAGGATGAAATTTGGAGGCCTTGTTTGAAAGGAATCCACCCTGTCTGGTTGCTGGTGTTTAGAGTTTTTGCGTTTTTTGTGCTTTTGGTGCTTCTCACACTCACTGCCACTGCGGACGGAGGAAGCATTTTCTACTTTTACACTCAGTGGACTTTTGCTGCAATCACTATTTATTTTGGGCTGGGATCTATGCTCTCCATGCATGGATGTTACCAACATCATAAAAAAGCCAGCGGTGATAAGGTTGAAAATGTAGATGGAGATGCAGAACAGGGAATTTATGATGCTCCAACACCCCCACAGAATACTAATCCATCCAGCCATGAGAAAGGCTTGGGAGCTCCACAAGAACATCTTGTTCGCCAACCTGCAGGCACTTGGGGTTatatctttcaaatattattccAGATGAATGCAGGTGCTGTCATGCTCACAGATTGTGTGTTTTGGTTCATAATTGTTCCGTTTCTAACCATCAAAGATTACAACATAAATTTGCTAATAATCAGTATGCATACCATCAATGCTGTTTTCCTGCTAGGCGATACGGCTTTAAATTCCCTGAGGTTCCCTTGGTTTCGAATAGGATACTTTTGCATGTGGACAATCACATATGTGATTTTCCAGTGGATTGTTCATGCTATAGTTAAACTCTGGTGGCCATATCCATTTCTTGATTTGTCATCGCCGTATGCTCCACTATGtTACTTTTCTATGGCAATACTGCATGTTCCGTGCTATGGCATATTCGCTTTGATAATGAAGCTGAAACACAGCGTGTTGTCGACGCGGTACCCTGACTCGTACCTATGTGTCAGATGA 1047 0.4279 MRFVTGSPKGTWEPIMTADTTTQSYWLNWRVLVCAIWVLLSAICSLLLIWKYEASRRPPTNDNKESQKETSSTLYEDEIWRPCLKGIHPVWLLVFRVFAFFVLLVLLTLTATADGGSIFYFYTQWTFAAITIYFGLGSMLSMHGCYQHHKKASGDKVENVDGDAEQGIYDAPTPPQNTNPSSHEKGLGAPQEHLVRQPAGTWGYIFQILFQMNAGAVMLTDCVFWFIIVPFLTIKDYNINLLIISMHTINAVFLLGDTALNSLRFPWFRIGYFCMWTITYVIFQWIVHAIVKLWWPYPFLDLSSPYAPLCYFSMAILHVPCYGIFALIMKLKHSVLSTRYPDSYLCVR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu6g1387 348 PANTHER UNCHARACTERIZED 10 348 - -
Ssu6g1387 348 MobiDBLite consensus disorder prediction 171 185 - -
Ssu6g1387 348 MobiDBLite consensus disorder prediction 165 187 - -
Ssu6g1387 348 PANTHER PROTEIN, PUTATIVE-RELATED 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu6g1387 Ssu-Chr6 22812319 22814887 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu6g1387 - - gmx:100787604 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2240 1 63579105 63581714 Ssu6g1387 6 22812319 22814887 ECH
Ssu5g1096 5 34689452 34693131 Ssu6g1387 6 22812319 22814887 ECH
Ssu6g1387 6 22812319 22814887 Ssu6g1387 6 22812319 22814887 ECH
Ssu6g1387 6 22812319 22814887 Ssu1g2240 1 63579105 63581714 PCT