Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu5g1096 ATGAGTTTCTTAACAGGGTCTTCTACGCACACATGGCAACCCACCGTGACTTCAGATACTACTGCCCTAAGTTATTGGTTGAATTGGAGGTTCTTCTTCTGTGCACTATGGGTTTTAGCCTCCATGGctctagcattttttttaatattcaagtATGAAGGATTCATCAAATCAAGATCAAATAGAGGAGAAAATCAGGGAGAAGAAGCTGGATTGCTATATGAGGATGAAGCATGGAATACATGTCTTGAAGGAATTGATCCTTCATGGCTGCTgatttatagaataatttgttttattgtgcTTTTGGCTTTGATCATTGCCAGTGTGGCCGCAGATGGAGGAGGCATACTTTACTTCTACACTCAATGGACCTTTACTTTGGTTACTATTTACTTTGGGTTTGGATCATATTTCTCCTTACATGGATGTTCCcaaaaacacaataaatttgGGAGCAGCACAGTCAATGGTACTTCTTTAGATGCAGACCTAGGAACTTACATAGTTCCCGATCAGGAATCTCATACTCGGAAAACTGCGGGTTTATGGGGTTACgttttccaaataatttttcagactTGTGCAGGTGCTGTCGTGCTAACTGACTCTGTGTTCTGGTTCATCATTTATCCATTTCTGACGTCCAAAGATTACGGTGTCGATTTTTTGATTTTTTGTATGCACTCCATTAATGCTCTTTTCCTCCTCGGTGACACATCATTGAACTGCATGAGATTTCCAATGTTTCGATTTGCATATTTTGTCTTGTGGACgactatttttgtgattttccaGTGGATCATCcatgtttttgtttcattttgGTGGCCTTATCCATTCCTTGATTTATCATCCTCATATGCCCCCTTATGGTACCTGGCTGTGGCTTTGATGCACTTTCCATGCTACGGCATCTTTGCTTTAATAGTAAGGATGAAGCACTTGTGGTTATCAAGATCGTTTCCTGGGTCTACCCGGTTTGTACGGTGA 993 0.3686 MSFLTGSSTHTWQPTVTSDTTALSYWLNWRFFFCALWVLASMALAFFLIFKYEGFIKSRSNRGENQGEEAGLLYEDEAWNTCLEGIDPSWLLIYRIICFIVLLALIIASVAADGGGILYFYTQWTFTLVTIYFGFGSYFSLHGCSQKHNKFGSSTVNGTSLDADLGTYIVPDQESHTRKTAGLWGYVFQIIFQTCAGAVVLTDSVFWFIIYPFLTSKDYGVDFLIFCMHSINALFLLGDTSLNCMRFPMFRFAYFVLWTTIFVIFQWIIHVFVSFWWPYPFLDLSSSYAPLWYLAVALMHFPCYGIFALIVRMKHLWLSRSFPGSTRFVR 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu5g1096 330 PANTHER PROTEIN, PUTATIVE-RELATED 17 330 - -
Ssu5g1096 330 PANTHER UNCHARACTERIZED 17 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu5g1096 Ssu-Chr5 34689452 34693131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu5g1096 - - gmx:100801420 608.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu5g1096 5 34689452 34693131 Ssu5g1096 5 34689452 34693131 ECH
Ssu5g1096 5 34689452 34693131 Ssu1g2240 1 63579105 63581714 ECH
Ssu5g1096 5 34689452 34693131 Ssu6g1387 6 22812319 22814887 ECH
Ssu2g1792 2 68698097 68703482 Ssu5g1096 5 34689452 34693131 PCT