Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu1g2240 ATGGGTTTTCTAACAGGCTCTCACAAAGACTCATGGCAGCCCATTATGACTGCTAAGACAAACACTCAGAGTTACTGGCTTAATTGGAGAGTTTTGCTTTGTGCAATATGGATTCTGGTTTCACTCATCTTGTCATCATTGCTGATATGGAAGTATGAACGTTTGAGAAAACCAGCAAGAAATGGTAGCAGAGAACCCCAACAAGAAACATCAGCAACTTTGTATGAGGATGAAACTTGGAAGCCTTGCCTGAAAGGAATTCACCCTGCATGGCTCATGGCTTTCAGAGTTGTGGCATTTATTGTGCTTTTGGTGCTTCTCGTAATCAATGCAGTTGTTGATGGAGGAAGCATTTTCTACTATTACACTCAGTGGACTTTTACTTCAATCACCATTTATTTTGGGCTTGGATCTTTGCTCTCCATAAATGGATGTTACCAACATCATAAGAAAGCAACTGGGGATAAGGTTGATAATGTGGATGGAGATGCAGAGCAAGGAATGTATGATGCTTCTGCACTCCCACAAAGTTCTAATCCATCTGACCAAGTGAAAAGCCTGGGCGCCCCGGAAGAAGTTCTTGTTCGTCAACAGGCAGGCATTTGgggttatatttttcaaataatattccAGATTAATGCTGGTGCTGTCATGCTCACTGATTGTGTATTTTGGTTCATAATTGTTCCATTTCTAACCATCAAAGATTACAACCTAAATTTTTTGATAGTCATTATGCACTCAATCAATGCAGTTTTCCTTATAGGTGATACAGCTTTAAATTGTCTGCGGTACCCTTGGTTTCGAATAGGATACTTTTGCCTGTGGACAGCCACATATGTGATTTTCCAGTGGATTGTTCATGCTTGCATTAATCTCTGGTGGCCATATCCATTTCTTGACTTGTCATCCTCTTATGCTCCACTATGGTACTTGGCGGTGGCATTGTTGCAGATTCCATGCTATGGAATTTTCGCTCTGTTAATGAAGCTGAAACACTATGTCTTGTCAACACGGTACCCGGACTCGTATCAATGTGTTAGATGA 1047 0.4031 MGFLTGSHKDSWQPIMTAKTNTQSYWLNWRVLLCAIWILVSLILSSLLIWKYERLRKPARNGSREPQQETSATLYEDETWKPCLKGIHPAWLMAFRVVAFIVLLVLLVINAVVDGGSIFYYYTQWTFTSITIYFGLGSLLSINGCYQHHKKATGDKVDNVDGDAEQGMYDASALPQSSNPSDQVKSLGAPEEVLVRQQAGIWGYIFQIIFQINAGAVMLTDCVFWFIIVPFLTIKDYNLNFLIVIMHSINAVFLIGDTALNCLRYPWFRIGYFCLWTATYVIFQWIVHACINLWWPYPFLDLSSSYAPLWYLAVALLQIPCYGIFALLMKLKHYVLSTRYPDSYQCVR 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu1g2240 348 PANTHER UNCHARACTERIZED 10 348 - -
Ssu1g2240 348 PANTHER PROTEIN, PUTATIVE-RELATED 10 348 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu1g2240 Ssu-Chr1 63579105 63581714 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu1g2240 - - gmx:100799543 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu1g2240 1 63579105 63581714 Ssu6g1387 6 22812319 22814887 ECH
Ssu5g1096 5 34689452 34693131 Ssu1g2240 1 63579105 63581714 ECH
Ssu1g2240 1 63579105 63581714 Ssu1g2240 1 63579105 63581714 ECH
Ssu6g1387 6 22812319 22814887 Ssu1g2240 1 63579105 63581714 PCT