Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2929 ATGGGAGAACATGAGGGGTGGGCACAGCCACCTAGTGGGCTATTGCCAAATGGCTTGTTGCCCAATGAAGCTGCCTCTGTGATACAGGTGCTTGACTCGGAGCGGTGGTTGAAAGCTGAGCAAAGGACTGCAGAGCTGATTGCCTGCATTCAGCCTAATCCGCCCTCTGAGGAGCGCCGGAATGCGGTTGCCGACTATGTCCAACGGCTGATCATGAAATGCTTCCCTTGCCAGGTGTTTACCTTTGGGTCGGTACCCCTCAAAACTTATTTGCCTGATGGAGATATTGACTTAACAGCATTCAGTAAGAATCAAAATCTGAAGGATACATGGGCACATCAGGTTCGAGACATGCTGGAGAATGAGGAGAAGAATGAGAATGCAGAGTTTCATGTCAAGGAGGTTCAGTACATTCAGGCTGAAGTGAAAATTATAAAGTGTCTTGTTGAGAATATTGTAGTAGACATTTCATTTAACCAGCTTGGAGGGTTGTGCACCCTTTGTTTTCTTGAGGAGGTTGATAATCTGATTAaccaaaatcatttattcaaGCGTAGCATTATCCTGATAAAAGCTTGGTGTTACTATGAGAGCCGTATACTTGGTGCCCACCATGGACTTATCTCAACTTATGCCTTAGAAACCTTGGTTCTTtacatttttcatgttttcaacAATTCTTTTGCTGGACCACTTGAGGTAGCTGAAATTAGATGGCTTTCTTTTATTTCATTCTTTAGTAAGTTTGACTGGGATAATTTCTGCGTAAGTCTATGGGGTCCAGTACCTATTAGTTCACTCCCAGATGTGACAGCTGAACCTCCTCGAAAAGATGGTGGAGATTTACTGCTCAGCAAGTTATTTCTGGACGCCTGTAGCTCAGTTTATGCTGTTTTCCCTGGTGGCCAAGAAAATCAGGGGCAACCCTTTGTTTCCAAGCATTTCAATGTTATTGATCCTTTGCGTGTCAACAATAACCTTGGCCGTAGTGTCAGCAAAGGTAATTTCTTTAGGATACGCAGTGCCTTTGCATTTGGGGCAAAAAGGCTGGCTAGATTACTTGATTGCCCAGAGGAGGATTTGTTTTCTGAGGTCAATCAGTTCTTTTTTAACACTTGGGACAGACATGGAAGTGGGGAAAGGCCTGATGTTCCAAGCATTGACTTACGGCGTTTGAGTTTATCCAGTCATGACCAATTACAGAGGTTTGAGAATCTATGgaacaataatcataaaattgataatgCCTCCAATCATGAATTTAATGAAGGGGAACATGTTTCACAAAGTGGTTTATCTCAGTATAGTAATTTATCATCTGAAAAGTCATCTAGAAGTGTTGTTTCTACAGTGTCACATACTCAGAATCAAAAGAGTTATGGAAGCCAAAATAATTCAAGGACCTTTGATCAAGTCCGGAGGGAAACTAATTCTAATCGAGTTGCTCATGTTGATAAAGGTCAAAGAATTGTTAAAGCCGATAACCTAGTGAGTGATGTCCAGGGAAGGTTTCTATTTGCCAGGACACGTTCTAGCCCTGAGCTGACTGACTCATATGGTGATGTTTCTTCCCAAGGAAGTCGTACGAAAGCAACAGAAAGTAATAAAGGCCAGAGTTCCTTTGCAAAGTTGGAGAATAGTCGTAGGAAAAATGTTGAACCTGCTGTAGCTGGAAGAATTGACGAGTCATCTGCTAGGCACATGTCATCTCGTCAAGTTCTTGAAAGTGCTACTGATTCAAGCAGTAATCATGATGAATCAGGCTCAGGTGTCATGGGTGAAGAGTTTGCGTCTGTTGCTGGTGCAGGTGGAATGCAGATGATGCATCAGGAGGAGCAGGACCTTCTGAATATGATGACATCTCCCGCAGCTCAGGGTTTCAGTGGTCAGACTCCTGTTCCAATGAATATTGCAACGGGTCACCTACCATTTCCCTTTCCACCTTCCATTCTTGCATCAATGGGATATTCTCAGAGAAATATGGGTAACATTCCCTTTATTGAGGCTCCTTGGGGTACAAATATGCAATTTCCTCAAGGTTTCATCCCTTCACCATTGACTCCATATTTCCCTGGCATGGGAATGACCTCAAATCCTCAAGATTTACTTGAAACTAACAATGAAAATTTCAGTTCTGTTGAGATGAACATAGCAGAAGCTGATAATGATTACTGGCATGAACAGGAAAGGGGTTCTGCTAGTGAGGTTGAAGTTGATGATGGAAATTTTGAAATGCTTCCAGAGGATAGACAACAGTCTACTTCGGGTAGTTATAACACTGCCCCGTTGTCTCGGGTAGGCAGCTCCAACAGCAACAGTTCTGCCAGAGTTCAGCAGAAGTTTACCAAAGAAAACCGAGGTTCAACAAGAGAAGAGCATATTGATAATTTGCATTATCAAGATAACCGAAGAAACGAGGTTTATTTTGATGATAGAATAGCAAATTCTGAGTTGTCCAGTGCACCTCCTTCGAGCTCCCTCAGGAATAGGACCCCTTCTGAAAGCTCTTGGGATGGATCGTCAGCCAAATCCTCAAAATCAACAAGGGAGAGAAGGGGGAGGAATTACGGGAAGGGTAAGAATGTTTCAGAAATTTCATCTAATCAAGTAGATGATGAAAACAGAGAGTGGACTCCTTTGTCGACTATGACATCTGATATGTCAGAAAGAAGCACTTTGCCCACATCTGGTACATCCATGCATGTTCCAAGGAATCAAATATCTGGTTTTGAAACTGCTCAGACAAGTGGATCAGATTCCCCATTACCCATAGCTCCAGTGCTTTTAGGTCCTGGTTCTCGCCAAAGAGCAATTGATAAATCTGGGGTTGTTCCATTTGCATTCTATCCTACAGGGCCACCTGTTCCATTTGTTACAATGCTTCCTTTGTATAATTTTCCAACCGAGTCTTCTGACACATCAACAAGCAACTTCAATGTGGAAGAAGGGGCAGATAACAGTGATTTAAGTCAGAATTTTGATTCATCTGAGGGATATGAACACCCTGAGGTGTCAAGCCCTTCCAATTCTATGACAAGGGTGGCTATTGAGTCATCAGAGCACAAGCCTGACATTCTTAATAGCGACTTTGTTAGCCAttggcaaaatttgcaatatgGCCGATTTTGTCAAAACTCACGTCATCCGCCTTCGATGACCTATCCTTCACCTGTTATGGTGCCTCCTGTTTATTTGCAGGGTCAATATCCTTGGGATGGTCCTGGAAGACCTCTTTCTGGTAACATGAATATTTTCAGTCAGCTTATGAGCTATGGGCCACGTCTGGTTCCAGTTGCTCCTTTCCAGTCGGTTTCTAATAGACCTGTCAGTATCTACCAACGTTATGTAGATGATATGCCACGGTATCGAAGTGGGACTGGAACCTACCTGCCTAATCCGaaGGTTTCTGTTCGGGATCGGCATTCCACAAATACCAGAAGGGGAAATTATAACTATGATAGAAATGACCATCACGGTGATAGAGAAGCAAATTGGAATACGAACTCAAAGTTGCGAGGAACCGGGCGTGGCCATAATCGCAACCAAACAGAGAAGACCAGCTCAAAGTCAGAGCGGTTGTCAACCAGCGAGAGCCGTGCCGAGAGACCATGGGGTTCACATAGGCATGATACCTTCATTCCTCATCAGAATGGTCCAGTCCGCTCAAATTCCTTGCAGAGTAATCCTTCCAATGTAGCTTATGGAATGTACCCTATACCAGCCATGAACCCAAGCGGGGTCTCGTCAAATGGACCAATTGTAATGTTGTATCCTTACGATCATAATGCTGGCTACGGTTCACCGGCGGAGCAGCTTGAGTTTGGGACTCTGGGACCAATGGGGTTCTCAGCTGTCAATGAAATGTCACAGGCAAATGAGGGGAGTCAATCTAGTGGTGCCCATGAAGAGCAAAGGTTTCATGGTGGTCACACCCAACGATCTTCGCCAGATCAACCCTCCTCACCTCATGTCTCAAGGTAG 3981 0.4326 MGEHEGWAQPPSGLLPNGLLPNEAASVIQVLDSERWLKAEQRTAELIACIQPNPPSEERRNAVADYVQRLIMKCFPCQVFTFGSVPLKTYLPDGDIDLTAFSKNQNLKDTWAHQVRDMLENEEKNENAEFHVKEVQYIQAEVKIIKCLVENIVVDISFNQLGGLCTLCFLEEVDNLINQNHLFKRSIILIKAWCYYESRILGAHHGLISTYALETLVLYIFHVFNNSFAGPLEVAEIRWLSFISFFSKFDWDNFCVSLWGPVPISSLPDVTAEPPRKDGGDLLLSKLFLDACSSVYAVFPGGQENQGQPFVSKHFNVIDPLRVNNNLGRSVSKGNFFRIRSAFAFGAKRLARLLDCPEEDLFSEVNQFFFNTWDRHGSGERPDVPSIDLRRLSLSSHDQLQRFENLWNNNHKIDNASNHEFNEGEHVSQSGLSQYSNLSSEKSSRSVVSTVSHTQNQKSYGSQNNSRTFDQVRRETNSNRVAHVDKGQRIVKADNLVSDVQGRFLFARTRSSPELTDSYGDVSSQGSRTKATESNKGQSSFAKLENSRRKNVEPAVAGRIDESSARHMSSRQVLESATDSSSNHDESGSGVMGEEFASVAGAGGMQMMHQEEQDLLNMMTSPAAQGFSGQTPVPMNIATGHLPFPFPPSILASMGYSQRNMGNIPFIEAPWGTNMQFPQGFIPSPLTPYFPGMGMTSNPQDLLETNNENFSSVEMNIAEADNDYWHEQERGSASEVEVDDGNFEMLPEDRQQSTSGSYNTAPLSRVGSSNSNSSARVQQKFTKENRGSTREEHIDNLHYQDNRRNEVYFDDRIANSELSSAPPSSSLRNRTPSESSWDGSSAKSSKSTRERRGRNYGKGKNVSEISSNQVDDENREWTPLSTMTSDMSERSTLPTSGTSMHVPRNQISGFETAQTSGSDSPLPIAPVLLGPGSRQRAIDKSGVVPFAFYPTGPPVPFVTMLPLYNFPTESSDTSTSNFNVEEGADNSDLSQNFDSSEGYEHPEVSSPSNSMTRVAIESSEHKPDILNSDFVSHWQNLQYGRFCQNSRHPPSMTYPSPVMVPPVYLQGQYPWDGPGRPLSGNMNIFSQLMSYGPRLVPVAPFQSVSNRPVSIYQRYVDDMPRYRSGTGTYLPNPKVSVRDRHSTNTRRGNYNYDRNDHHGDREANWNTNSKLRGTGRGHNRNQTEKTSSKSERLSTSESRAERPWGSHRHDTFIPHQNGPVRSNSLQSNPSNVAYGMYPIPAMNPSGVSSNGPIVMLYPYDHNAGYGSPAEQLEFGTLGPMGFSAVNEMSQANEGSQSSGAHEEQRFHGGHTQRSSPDQPSSPHVSR 1326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 747 782 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 844 858 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 423 472 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 1311 1326 - -
Ssu4g2929 1326 SUPERFAMILY PAP/OAS1 substrate-binding domain 182 356 - -
Ssu4g2929 1326 Gene3D Beta Polymerase, domain 2 52 161 IPR043519 -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 860 902 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 1139 1165 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 1286 1302 - -
Ssu4g2929 1326 CDD NT_PAP_TUTase 59 166 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 513 545 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 567 588 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 1286 1326 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 747 799 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 783 799 - -
Ssu4g2929 1326 PANTHER - 1 1326 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 513 591 - -
Ssu4g2929 1326 Gene3D - 162 364 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 423 480 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 816 902 - -
Ssu4g2929 1326 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 1 1326 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 1177 1209 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 817 843 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 1122 1226 - -
Ssu4g2929 1326 MobiDBLite consensus disorder prediction 969 1010 - -
Ssu4g2929 1326 SUPERFAMILY Nucleotidyltransferase 22 201 IPR043519 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2929 Ssu-Chr4 74702584 74709137 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2929 - - gmx:100809742 2388.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g2929 4 74702584 74709137 Ssu4g2929 4 74702584 74709137 ECH
Ssu4g2929 4 74702584 74709137 Ssu4g0137 4 2317434 2318507 ECH
Ssu4g0138 4 2318801 2325803 Ssu4g2929 4 74702584 74709137 PCT