Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g0137 ATGAACCATCTGTCTGATTTGGTTTGGCTAATAATTGCATTTATTTATGATGTGCATGAACCAGGAAATTTCTTTAGAATACGCAGTGCTTTTGCATTTGGGGCCAAAAGGCTTGCCAGATTGCTTGATTGCCCAAAGGAGGAATTGTTTTTTGAAGTCAATCAGTTCTTTATGAACACTTGGGTCAGACATGGAACTGGGCAGCGACCTGATGCTCCAAACAATGACTTATGGTGTTTGAGGTTATCTAGTCATGACCAATTACAGGGGTCTGAGAATCTCCAGAAAAATAgccaaaaatttgataatacCTATAATCATGAATTTCAAGTGAAAGGGGTGCATGCTTCACAAAGTGGTCTATCTCAGCACAGTACTTTGTCCACTGAAAGCTTATCTAAGAGTAGTGATGTTTCTACACTATCACATTCTTATGTTAACCAAAATAATGCAAGGAATTTTGATCAGGTCAGAAGGGAAGCTAATTGTAATCAAGGTACTCGTGTTGATAAAGGACGGAGAAACATTAAACCAAATAACCCATTCAATGATGTTCCAGGAAGGCTTTTATTTGCAAGAACATGTTCTAGTCCTGAGTTGACAGACTCATATAGTGAAGCTCCTACCCAAGGAAGACATACAAGAGCCCCAGAAAGTGGGAAAGGCCCAACTTCCTCTGCAAAGTTGGAGAATGGTCACAGGAAGTATCTTGATTCTGACACGCCTGCTAGTTATGGTGTTAGAATTGACGATTCATCTGCTAGGCACATCATATCTCGTCAAGTTAATGATAGTGCTGCTGATTCAGACAATGGCTCCAATAGTTATGATGATGAATCAGTAGGTGGAACACATATGATGCATCAGGAGGAGCAGGACCTTTTGAACATGATGACATCTCCCACAGCTCAAGGTTTCACTGGTCAGGCTCACATTCCAGTGAATTTAGCCGCAGGTCACCTACCACTTCCATTTTCACCTTCCATTCTTGCATCAATGGGATATGCTCAAAGAAACATGGGTAACATTCCCTTGATTGAGGCTCCTTGGGGTACTAATATGCAATTTCCTTAA 1074 0.4032 MNHLSDLVWLIIAFIYDVHEPGNFFRIRSAFAFGAKRLARLLDCPKEELFFEVNQFFMNTWVRHGTGQRPDAPNNDLWCLRLSSHDQLQGSENLQKNSQKFDNTYNHEFQVKGVHASQSGLSQHSTLSTESLSKSSDVSTLSHSYVNQNNARNFDQVRREANCNQGTRVDKGRRNIKPNNPFNDVPGRLLFARTCSSPELTDSYSEAPTQGRHTRAPESGKGPTSSAKLENGHRKYLDSDTPASYGVRIDDSSARHIISRQVNDSAADSDNGSNSYDDESVGGTHMMHQEEQDLLNMMTSPTAQGFTGQAHIPVNLAAGHLPLPFSPSILASMGYAQRNMGNIPLIEAPWGTNMQFP 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g0137 357 MobiDBLite consensus disorder prediction 147 247 - -
Ssu4g0137 357 MobiDBLite consensus disorder prediction 262 280 - -
Ssu4g0137 357 MobiDBLite consensus disorder prediction 262 282 - -
Ssu4g0137 357 PANTHER PAP/OAS1 SUBSTRATE-BINDING DOMAIN SUPERFAMILY 21 356 - -
Ssu4g0137 357 PANTHER - 21 356 - -
Ssu4g0137 357 MobiDBLite consensus disorder prediction 196 212 - -
Ssu4g0137 357 MobiDBLite consensus disorder prediction 147 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g0137 Ssu-Chr4 2317434 2318507 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g0137 - - adu:107463396 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g0137 4 2317434 2318507 Ssu4g0137 4 2317434 2318507 ECH
Ssu4g2929 4 74702584 74709137 Ssu4g0137 4 2317434 2318507 ECH