Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g2234 ATGGACTGGGTCTTCGATCGACCTAATTGCCATCTTAAGCCATTTCATGTAAGTGTTCATGACTTTTGGGACTATGTTATGGATTGGGCCTTCAGTTGGCCCAATTGCCCTTTCAAGTCACTTCATGCAACTTCCAGAACTATATTACGGACTAGGCTTGAGGTCAACCTAATTGCCCTTTCTAGCCACTTTATTAGGGCCTTTAGTCGGCTTAACTGTCCTCTCAAGTCACTTCATGTGAGCACTCGAGCTACCTCACTCTCTCCAACATTCCACaaactcaaaattcaaatttcgtTCTCCATGGCTGACAACTTGGACGACGGCGAGTTTTGGCTCCCACCTCAGTTCCTCACCGACGACGACACGTCGttcgacaacaacaacaacaacaacaaaaacctCTCCAAAAACGACGACGTCTTCGACGCCGTCTCGAGGGCTCTGTTCCCGTACCTCAGCTCCGCCAGCGAGACCGAGAGCGACGAGGAAGAGCACCTCGCCGAGTTGACTCGCCGAGTCGCTCACTCTACTCTGGAACTCGATCTCGAGAAACCCAAGgGCGTGTTTGGGGGTGGTTCGCCGCAGTCAACGCTGAGCGCGTTCGGGAGCAGCGGGAAGGGCTCGAGTCCAAACGGCGGCGTTTTGCACGCGAACTCGCAGAGCGCGACGCGGGATCTGCTGCGCGCGGCCGCAGGGGAAGTCGAGAGGATGCGCCTCGGCGAGGACCGTTACGGCTACGGTTCTCTCCATAACAACGCGCCGAAGTCCTCTCTCGTTGGGTTAAGATTTTACTCTCAGCAGCAACATCAACCGTCGCTTTCTCACCAGCAGTTACAGATTGCGCAATTTCAGATGCTGAGGCAGCAACAGATGGCGAAGCAGCAACAGAGGGGAATGGTCCCCAACAGAGGAAGGAACAACAACGTTAGGGGTGGCAGCAGCAACGTTGGTTTGTCTGCTTCTGCATGGCCTCCTTTGCAGCACGCGTCTGGCATGAGGGCTGTTTTTCTGGCTGGGAAAACGGAGAGCACCGGAACCGGCGTGTTCTTCCCTCGCTGTGTCGATACTCGTAATGAAACTCGGAAAGAGCCAGCGTGTAATACTGTGTTGGTTCCAGATAGAGTGGCGCAGGCGTTGAATCTGAGTCTGGAGGGTGTGGTGGGTGGCCACTTGCAGCACCACCACCAGCAGCGTTTCAATGGGGAAAATGGATCGGCGGTTCCAAGGGTTCggagtaataataataataataattattattatggtttttCTCATCCGAAGCGCAACAACATAAGGCCGCCGCCACAAGTGAACCATGAGATCCAGTTGCCTCAGGAATGGACTTATTGA 1353 0.5129 MDWVFDRPNCHLKPFHVSVHDFWDYVMDWAFSWPNCPFKSLHATSRTILRTRLEVNLIALSSHFIRAFSRLNCPLKSLHVSTRATSLSPTFHKLKIQISFSMADNLDDGEFWLPPQFLTDDDTSFDNNNNNNKNLSKNDDVFDAVSRALFPYLSSASETESDEEEHLAELTRRVAHSTLELDLEKPKGVFGGGSPQSTLSAFGSSGKGSSPNGGVLHANSQSATRDLLRAAAGEVERMRLGEDRYGYGSLHNNAPKSSLVGLRFYSQQQHQPSLSHQQLQIAQFQMLRQQQMAKQQQRGMVPNRGRNNNVRGGSSNVGLSASAWPPLQHASGMRAVFLAGKTESTGTGVFFPRCVDTRNETRKEPACNTVLVPDRVAQALNLSLEGVVGGHLQHHHQQRFNGENGSAVPRVRSNNNNNNYYYGFSHPKRNNIRPPPQVNHEIQLPQEWTY 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g2234 450 PANTHER TIP41-LIKE PROTEIN 102 450 - -
Ssu4g2234 450 MobiDBLite consensus disorder prediction 193 220 - -
Ssu4g2234 450 MobiDBLite consensus disorder prediction 185 220 - -
Ssu4g2234 450 PANTHER TIP41-LIKE PROTEIN 102 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g2234 Ssu-Chr4 53058731 53065118 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g2234 - - gmx:100782156 303.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu6g2983 6 68576755 68578253 Ssu4g2234 4 53058731 53065118 ECH
Ssu3g1221 3 29719306 29720814 Ssu4g2234 4 53058731 53065118 ECH
Ssu4g2234 4 53058731 53065118 Ssu4g2234 4 53058731 53065118 ECH