Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu3g1221 ATGgtgtgtttttggttttttctttttaagtggaAACTACGGTTTTTATGGGCTCTAGAATTTTTGTGTTTGGCTTTATTACAGGGTCGGTTTGTGTCTGGTTCTCCGCAATCTACTCTCTGTGCTTTTGGAAGCGGGTGTGGGTGTGGCAAAGGGTCGAGCCAGGGCAGTCCCAACGGCGTTTGCAAGTTGTCTTCTGCGAAGACCACTTGGGATCTGCTGCATGCTGCTGCAGGGGAAATGGAGAGGATGCGGTTGAGCCAAGAAGGTTATGTTTTCAACCATCACAGTCATAATGGTCTCTTGGTTCCTCAAAGAAAACCCTCTTCTGCTACCACCCTTCCCTCCAAGAGCACCACCACAACAAATCCTGATGTGGGGTTTTACACCCAACAGTCACTTTCTTACCACCAGCAGTTACAAATAGCACAATTTCAGGTGCTGAGGCAGCAGCAGCTGGCGAGGCAGCAGAATTCGGTGTGGAATGTGCAGAAACAATGTGGTGGGGTTTACAACCAGGGGCAAAAAAGCAACCAAGTGGCTCTCAACAGAGGGAGGAACAGTGATGTTGGTGGAAGAAACGTTAGGCCTTTGGGTTTGTCTGCATCTGCATGGCCTCCTCTGCAGCATGCGAAGCAGCAGAACCAGCTTAATGGTTCTGGCATGAGGGCTGTTTTTCTCGAAAACCCTTCGGGGAGAAGGGAATGTGCTGGCACTGGGGTGTTCTTGCCCCGGCGAGTAGATAGTCCTGAACCAAGAAAGAAGCCAGCGTGTTCAACTGTGCTGGTTCCCACTAGAGTGGCGCAGGCCCTAAATCTGAACCTTGAAGACGTGACGGGGTGCCAGCCGCAACACTTGCATCGATTTAATGCCAGTTCGAACATGGAAAATGGTGCAGCTGTTTCCAGGTTGAGGAGTAATTATGTCCTTTCACAACAGAATCGCAACGTCAAGCCTCAGCCAGCAGTGTACCATGAGATTAGGCTGCCACAGGAGTGGACATActga 1008 0.4891 MVCFWFFLFKWKLRFLWALEFLCLALLQGRFVSGSPQSTLCAFGSGCGCGKGSSQGSPNGVCKLSSAKTTWDLLHAAAGEMERMRLSQEGYVFNHHSHNGLLVPQRKPSSATTLPSKSTTTTNPDVGFYTQQSLSYHQQLQIAQFQVLRQQQLARQQNSVWNVQKQCGGVYNQGQKSNQVALNRGRNSDVGGRNVRPLGLSASAWPPLQHAKQQNQLNGSGMRAVFLENPSGRRECAGTGVFLPRRVDSPEPRKKPACSTVLVPTRVAQALNLNLEDVTGCQPQHLHRFNASSNMENGAAVSRLRSNYVLSQQNRNVKPQPAVYHEIRLPQEWTY 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu3g1221 335 MobiDBLite consensus disorder prediction 103 125 - -
Ssu3g1221 335 PANTHER TIP41-LIKE PROTEIN 28 335 - -
Ssu3g1221 335 PANTHER TIP41-LIKE PROTEIN 28 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu3g1221 Ssu-Chr3 29719306 29720814 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu3g1221 - - gmx:100795977 476.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu3g1221 3 29719306 29720814 Ssu6g2983 6 68576755 68578253 ECH
Ssu3g1221 3 29719306 29720814 Ssu4g2234 4 53058731 53065118 ECH
Ssu3g1221 3 29719306 29720814 Ssu3g1221 3 29719306 29720814 ECH