Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu4g1243 ATGGCGTTCTCTTCTTTTCTCGGCAGAGTTCTCTTCGCCTCGGTTTTTATCCTCTCTGCTTACCAAGAATTTAATGCTTATGGAGTTGATGGGGGACCCGCAGCAAAGGCACTCAGACCGAAGTTTGATGCCTTTACACATCAAGTACATTCTAAAGTTGGCTTTCAACTTCCAGATATTGATatgaaatttttaattgctGGGGCTATTGCTCTCAAGGGCATTGGAGGGATTCTTTTCATACTTGGCAGCTCTTTTGGAGCTTTCCTTTTGCTTTTGCAACAAATGATTGCTACTCCGATACTGTATGATTTCTACAATTATGACAGTGAGGACAAAGAATTTATTCaacttttcatcaaatttactCAGAATATGGCCCTCTTCGGggctttgttgttttttattggGATGAAAAACTCCATTCCTAGAAGGCAACTCAAGAAGAAGGCTCCCAAAACAAAGACCTATTAG 474 0.3713 MAFSSFLGRVLFASVFILSAYQEFNAYGVDGGPAAKALRPKFDAFTHQVHSKVGFQLPDIDMKFLIAGAIALKGIGGILFILGSSFGAFLLLLQQMIATPILYDFYNYDSEDKEFIQLFIKFTQNMALFGALLFFIGMKNSIPRRQLKKKAPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu4g1243 157 PANTHER HR-LIKE LESION-INDUCING PROTEIN 1 157 - -
Ssu4g1243 157 PANTHER - 1 157 - -
Ssu4g1243 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu4g1243 Ssu-Chr4 19927630 19930391 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu4g1243 - - gmx:100500514 261.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1243 4 19927630 19930391 Ssu7g3188 7 75528782 75530692 PCT
Ssu7g2208 7 43349750 43352057 Ssu4g1243 4 19927630 19930391 PCT