Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g2208 ATGGCGTTCGCTTCTTTTCTTGGCAGAGTCCTCTTCGCTTCCATCTTCATACTCTCCGCTTACCAAGAATTTAATGAATTTGGAGTTGATGGGGGACCTGCAGCGAAAGCACTCAGACCGAAGTTTGATGCTTTTACACATCGAGTGCATTCTCAAGTTGGCTTTCAACTTCCAGAGATTGATatgaaatttttaattgctGGGGCTATTGCTCTGAAGGGCCTTGGAGGGGTTCTTTTCATATTTGGCAGCTCTTTTGGAGCTTTCCTTCTGCTCTTGCATCAGATGATTGCTACTCCAATCCATTGTGATTTTTACAATTATGACAGTGAGGACAAAGAATTTACTCaacttttcatcaaatttacaCAGAATATGGCTCTCTTTGGGGCTCTATTGTTCTTTATTGGGATGAAAAATTCGATCCCTAAAAGGCAACCCAAGAAGGctccaaaaacaaaaacctaTTAG 471 0.38 MAFASFLGRVLFASIFILSAYQEFNEFGVDGGPAAKALRPKFDAFTHRVHSQVGFQLPEIDMKFLIAGAIALKGLGGVLFIFGSSFGAFLLLLHQMIATPIHCDFYNYDSEDKEFTQLFIKFTQNMALFGALLFFIGMKNSIPKRQPKKAPKTKTY 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g2208 156 PANTHER - 1 156 - -
Ssu7g2208 156 PANTHER HR-LIKE LESION-INDUCING PROTEIN 1 156 - -
Ssu7g2208 156 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g2208 Ssu-Chr7 43349750 43352057 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g2208 - - gmx:100305592 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g2208 7 43349750 43352057 Ssu4g1243 4 19927630 19930391 PCT