Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g3188 ATGGGGTTCTTCTCCTTTCTAGGTCGCGCCCTCTTTGCCTCCCTCTTCATCCTCTCCGCATGGCAGATGTTTAATGAATTTGACGTCAATGGTGGACCTATTTCGAAGGAGTTGATTCCTAAGCTCATTGTTGTGAAGAAAAATTTGTCCTCCAAATTAGGGGTAGCACTGCCAGATATTGAtGCCCGACAATTCATTACTACTATCATATTTCTTAAGGGGGTTGGAGGGATTTTGTTTGTGTTTGGTAGCACACTTGGATCTTACCTACTGcTTTTGCATCTGGTGCTTACTACTCCACTTCTGTACGATTTCTACAACTATAGACCTAGCAACCCTAAATATAATCAGCTGCTGAATGAATTCATGCTGAACACAGCACTTTTTGGGGCATTGCTATTCTTTATTGGAATGAAGAACTCAATTCCTAGGAGTCAGCTTAGGAAGAAGACCCCTAAAGCTAAGACAATTTAG 474 0.4156 MGFFSFLGRALFASLFILSAWQMFNEFDVNGGPISKELIPKLIVVKKNLSSKLGVALPDIDARQFITTIIFLKGVGGILFVFGSTLGSYLLLLHLVLTTPLLYDFYNYRPSNPKYNQLLNEFMLNTALFGALLFFIGMKNSIPRSQLRKKTPKAKTI 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g3188 157 PANTHER BNAA10G27800D PROTEIN 1 156 - -
Ssu7g3188 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
Ssu7g3188 157 PANTHER - 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g3188 Ssu-Chr7 75528782 75530692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g3188 - - gmx:100786502 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu4g1243 4 19927630 19930391 Ssu7g3188 7 75528782 75530692 PCT