Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g1947 ATGGAAAAGCAAGGGCGAAAGATTGTGGTGGCTGTGGATGAGAGCCAAGAGAGCATGTATGCGCTGTCTTGGTGCATCACCAATCTTATTTCCGATGCCCCCACCAACAATAAGCTTGTGCTTCTTTATGTCAGGCCACCTTCTGCTTTCTACTCCTTGGATGCCGCagGGTATATCTTTTCCACTGATGTTGTTGATGCTATGGAAAAGTACAGTATGCACTTAGCTAATTCAGTGATGGAAAGAGCTAAAGCTATTTGCAGAAACTTGAACGCTACTGATGTAGGCCACCTTATATAtcctactctttttctttttttttctggtttatttttctccttatatttttcattctttgaaATTGGGATTTTGCAGATCAATATGGAGAGGGTAGTTGGGATAGGAGATGCCAAGAATGTAATATGCAGCGCAGTGAAGAAACTAGATGCTGACACCTTGGTCATGGGAAGTCATGGCTATGGATTCTTTAAGAGGGCACTGCTTGGAAGTGTCAGTGATTACTGTGCCAAACATGCAAAGTGTCCTGTTGTAATCGTGAAGCACCCATAA 570 0.3947 MEKQGRKIVVAVDESQESMYALSWCITNLISDAPTNNKLVLLYVRPPSAFYSLDAAGYIFSTDVVDAMEKYSMHLANSVMERAKAICRNLNATDVGHLIYPTLFLFFSGLFFSLYFSFFEIGILQINMERVVGIGDAKNVICSAVKKLDADTLVMGSHGYGFFKRALLGSVSDYCAKHAKCPVVIVKHP 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g1947 189 CDD USP_Like 7 186 - -
Ssu7g1947 189 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 188 - -
Ssu7g1947 189 Gene3D HUPs 1 98 IPR014729 -
Ssu7g1947 189 Gene3D HUPs 120 189 IPR014729 -
Ssu7g1947 189 PRINTS Universal stress protein signature 147 159 IPR006015 -
Ssu7g1947 189 PRINTS Universal stress protein signature 165 187 IPR006015 -
Ssu7g1947 189 PRINTS Universal stress protein signature 5 23 IPR006015 -
Ssu7g1947 189 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 6 188 - -
Ssu7g1947 189 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 2 188 - -
Ssu7g1947 189 Pfam Universal stress protein family 128 187 IPR006016 -
Ssu7g1947 189 Pfam Universal stress protein family 6 58 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g1947 Ssu-Chr7 38858528 38859314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g1947 - - gmx:100306535 258.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g1947 7 38858528 38859314 Ssu7g1947 7 38858528 38859314 ECH
Ssu7g1947 7 38858528 38859314 Ssu4g0432 4 7042829 7043745 ECH