Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ssu3g1052 | ATGCCACCACACCCTCCTGCTCCTCCCACCACCGCCGCCGTCCCCGACGCCGTGGCCCGCTACCACACCCACGCCGTGGGGCCCCACCAGTGCTGCTCCGCCGTGGTCCAGGAGATCGCCGCCCCCGTCTCCACCGTGTGGTCCGTGGTGCGGCGCTTCGACAACCCGCAGGCCTACAAGCACTTCGTGAAGAGCTGCCACGTCATCCTCGGCGACGGCGACGTCGGCACGCTCCGCGAGGTCCGAGTCGTCTCCGGCCTCCCCGCCGCCGTCAGCACCGAGCGCCTCGACGTCCTCGACGACGAGCGCCACGTCATCGGCTTCAGCATGGTCGGCGGCGACCACCGCCTCTCCAACTACCGCTCCGTCACCACCCTCCACCCCCGCTCCGTCGCCGACCACCGCGCCGGCACCGTCGTCGTCGAGTCCTACGTCGTCGACGTGCCCCCCGGTAACACCACCGAAGACACGCGCGACTTCGTCGACACCATCCTCCGATGTAACCTCCAATCGCTCGCGAAATTCGCCGAGAATTTGGCCAGAACGAAACTGCATCAACAACGATGA | 567 | 0.6825 | MPPHPPAPPTTAAVPDAVARYHTHAVGPHQCCSAVVQEIAAPVSTVWSVVRRFDNPQAYKHFVKSCHVILGDGDVGTLREVRVVSGLPAAVSTERLDVLDDERHVIGFSMVGGDHRLSNYRSVTTLHPRSVADHRAGTVVVESYVVDVPPGNTTEDTRDFVDTILRCNLQSLAKFAENLARTKLHQQR | 188 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ssu3g1052 | 188 | SUPERFAMILY | Bet v1-like | 31 | 176 | - | - | |
| Ssu3g1052 | 188 | CDD | PYR_PYL_RCAR_like | 31 | 177 | - | - | |
| Ssu3g1052 | 188 | Pfam | Polyketide cyclase / dehydrase and lipid transport | 33 | 174 | IPR019587 | - | |
| Ssu3g1052 | 188 | Gene3D | - | 6 | 187 | IPR023393 | - | |
| Ssu3g1052 | 188 | PANTHER | - | 11 | 187 | - | - | |
| Ssu3g1052 | 188 | PANTHER | ABSCISIC ACID RECEPTOR | 11 | 187 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Ssu3g1052 | Ssu-Chr3 | 24652630 | 24653196 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ssu3g1052 | K14496 | - | gmx:100805378 | 307.76 |
Event-related genes