Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2873 ATGAGAGGTGCTAATGGAGGCGATGCCAGAGCAGTGAACAACACTTTGGCCACTATCAACGCTGCTGCCACTGCGATCGCTTCTGTCGAGAATCGCCTCCATCAATCCCATCCTCACGTGCAGAAAAAAAGCTGGGGAAGCTGGTTGAGCATATATTGGTGTTTTGGACATCGAAAAAACCCAAAGCGCATTGGGCATGCAGTCCTTGTTCCCGAAAGAACACCTTCTGGTGCAGATGCTACCGCACCTGTAAGTTCAACACAAGCACCTAGTATTCCCTTCCCCTTCGCTGCACCTCCCTCATCTCCTGCATCTTTCCTTCACTCAGAACCTCCTTCAGTTGCACAATCCCCAGGTGGTATACTATCCCTCACTTCTGTGTCTGCCAGTATGTACTCTCCCAGTGGTCCTTTCTCTATCTTTGCCATTGGACCTTATGCCCATGAAACACAATTAGTTTCACCGCCTGTCTTCTCAACATTCACCACTGAGCCATCAACCGCTCCCTTCACTCCACCTCCTGAATCTGTCCACTTGACTACACCTTCTTCACCTGAAGTGCCATTTGCTCAGCTGCTTGACCCCAACAAGAAGAACGGTGAGACCTATCAGAGGTTCCAAATATCTCAGTATGACTTCCACTCGTATCAGCTTCATCCTGGAAGTCCTGTTGGTCAACTCATTTCACCAAGATCTGCCTTCTCAGCTTCTGGCACCTCATCTCCTTTACTTGACACTGAGTTTACTTCTCGTGGCTCCCTCCTCCTTGACTTTCAAACACGTGACCCTCCCAAGCTTCTAAACTTTGATACACTGTCAACTCATGAAAAACAGAAGTCACATCAAGGTTCTGGCTCTCTAACCCCAGATTCTATAAGATCCACAACTCAAGCTGGTTTTCTTCCTAGTCACCGGGTATCTGAGATCATAATGTCCCCACAACCAAGAAATAATCGCCCGAATGAGATTAGTGTAAATCATAGGGTCTCAATTGAAGTATCTGCCCAAGAAGTATTGAAATGTGTGGAAAACAAGCCTGTGGCATGGACTAAAGCACCTAAATTCAAAACTGATGCAGCCGGAGCAGATAAGGAAGATAATTCAAGAGAAGTTCTTGTCACTGAAACTCCCGATGATGCACCACAGCAGACCATGGATGATGGAGATGTGGAAAAAGTACATCATAAGGATGAATGTATAACATTTTCTTCTGCTAAAGAATTCAACTTTGATAATGCAGAGGGAGGGGATTCTCCTGCGCCCAATATAGTTGCTGACTGGTGGGCAAATGAGAAAGTTGTAAGCAAGGAAGGAGGATCTTCCCATAATTGGTCTTTCTTCCCAATGATTCAACCTGGCGTTGGCTAA 1368 0.462 MRGANGGDARAVNNTLATINAAATAIASVENRLHQSHPHVQKKSWGSWLSIYWCFGHRKNPKRIGHAVLVPERTPSGADATAPVSSTQAPSIPFPFAAPPSSPASFLHSEPPSVAQSPGGILSLTSVSASMYSPSGPFSIFAIGPYAHETQLVSPPVFSTFTTEPSTAPFTPPPESVHLTTPSSPEVPFAQLLDPNKKNGETYQRFQISQYDFHSYQLHPGSPVGQLISPRSAFSASGTSSPLLDTEFTSRGSLLLDFQTRDPPKLLNFDTLSTHEKQKSHQGSGSLTPDSIRSTTQAGFLPSHRVSEIIMSPQPRNNRPNEISVNHRVSIEVSAQEVLKCVENKPVAWTKAPKFKTDAAGADKEDNSREVLVTETPDDAPQQTMDDGDVEKVHHKDECITFSSAKEFNFDNAEGGDSPAPNIVADWWANEKVVSKEGGSSHNWSFFPMIQPGVG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2873 455 MobiDBLite consensus disorder prediction 278 295 - -
Ssu2g2873 455 MobiDBLite consensus disorder prediction 162 186 - -
Ssu2g2873 455 MobiDBLite consensus disorder prediction 274 295 - -
Ssu2g2873 455 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN 1 454 - -
Ssu2g2873 455 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 454 IPR040420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2873 Ssu-Chr2 89906952 89909282 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2873 - - gmx:100777876 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2873 2 89906952 89909282 Ssu2g2873 2 89906952 89909282 ECH
Ssu7g0810 7 16228617 16231721 Ssu2g2873 2 89906952 89909282 ECH
Ssu2g2873 2 89906952 89909282 Ssu5g3072 5 78282733 78285102 PCT