Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0810 ATGGGAACCGTTATCAACAGCGTCGACACCGTGAATGCTGCGGCCTCCGCCATCGTCAATGCTCAATCCAGAATCCAACCCACCACCGTGCCGAAAAAACGCTGGGGAAGCTGCTGGAGCTTATATTGGTGTTTTGGACCTCATAAAAACGGCAAGAGAATTGGCAACACTGTCCTTGTTCCTGAACCTGTTGAACCAATAGGCACAGTTGGATCTCATCCTGCTACTGCTGCACCAAATCCTTCAACTGCCATTGTAATGCCATTCATTGTCCCTCCCTCTTCACCTGCATCTTTTCTCCAATCTGATCCTTCATCTGCTACTCAATCACCGGTTGGATTATTCTCTCTCAGTTCTCTCACTGTCAATGCTTCTGGTGGACCTGCATCCATTTTTGCCGTAGGCCCTTATGCCTACGAGACCCAGTTAGTCTCACCACCTGTATTTTCTACCTTCACAACTGAACCATCTACTGCTCCTTTCACTCCACCTCCTGAATCTGTGCAGCTGACAACACCATCATCCCCCGAGGTGCCATTTGCTCAATTGTTGGCGTCTTCTCTTGACCGGGATTGTATAAATAGTAGTACAAATAAGAAGTTTGCGTTATCCAATTATGAGTTTCAGCCTTATCAACAATATCCCAGAAGCCCTGGCACCCAATTCATATCACCTGGATCAATCATTTCTACTTCTGGCAGTTCTACTCCTTTCCCTGATAGACACCCTGTTCTTGAAGTCCACAAAGGGGAAGCACCAAAGCTCTTGGGCTTTGAACACTTCTTGACACATAAATGGAATTCGAGGCTTGGGTCTGGATCTTTGACACCAGACAGTGCAGGGCAAGGTTCAATACTAGGCTCAGGATCTTTGACACCTGATGCTAATAAGTTAGCTTCGCAACTAGGCTCTGGGTGTTTGACACCTGATGGTTTGTGTCAGGACTCAAGGTTGGGTTCTGGGTCTTCGACACCTGATGGTGTAGCATCAACTTCTAGAAATGACATCTATGTTGGAAAACGGATATCTGAGGTAACATCCCTTGCAATTTCGGAGAATGAGTGTCAACCCAATGCAGCATTAGTTGATCACAGAGTTTCATTTGAATTAACTGGGGAAGATGTTGCACAATGTCTTGCAAATAAATCAGGTTCTTCATTGCTTGAAAACATGTCAGGATCTTCTCAGGATACACTGGTTGAAGACCCTGTTGACAGAGAAAGGATACAAAAGAACTCCAATAGTTGTTGTGATTTGTGTTCAAGGAAAACTTCAAATGATAAGCCTAGCAATTCTCCAGAAGAAGGAGAGGAGCAGTGCTGTCGAAAGCATCACTCTTTCAATTCTTCCAAAGAATTTAACTTTGACAACAGAAAAGATGTTGTTTCTGATAATCCTGCCAATGGCTCCGAATGGTGGACTGACAAGAAGATTGTTAGTAAGGAAGGTAGATCAAGCAACAGTTGGGCTTTCTTCCCAATGCTACAATCAGAAATCAATTAA 1503 0.4438 MGTVINSVDTVNAAASAIVNAQSRIQPTTVPKKRWGSCWSLYWCFGPHKNGKRIGNTVLVPEPVEPIGTVGSHPATAAPNPSTAIVMPFIVPPSSPASFLQSDPSSATQSPVGLFSLSSLTVNASGGPASIFAVGPYAYETQLVSPPVFSTFTTEPSTAPFTPPPESVQLTTPSSPEVPFAQLLASSLDRDCINSSTNKKFALSNYEFQPYQQYPRSPGTQFISPGSIISTSGSSTPFPDRHPVLEVHKGEAPKLLGFEHFLTHKWNSRLGSGSLTPDSAGQGSILGSGSLTPDANKLASQLGSGCLTPDGLCQDSRLGSGSSTPDGVASTSRNDIYVGKRISEVTSLAISENECQPNAALVDHRVSFELTGEDVAQCLANKSGSSLLENMSGSSQDTLVEDPVDRERIQKNSNSCCDLCSRKTSNDKPSNSPEEGEEQCCRKHHSFNSSKEFNFDNRKDVVSDNPANGSEWWTDKKIVSKEGRSSNSWAFFPMLQSEIN 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0810 500 MobiDBLite consensus disorder prediction 155 174 - -
Ssu7g0810 500 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 499 IPR040420 -
Ssu7g0810 500 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN-LIKE 1 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0810 Ssu-Chr7 16228617 16231721 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0810 - - ccaj:109793217 873.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0810 7 16228617 16231721 Ssu2g2873 2 89906952 89909282 ECH
Ssu7g0810 7 16228617 16231721 Ssu7g0810 7 16228617 16231721 ECH
Ssu7g0810 7 16228617 16231721 Ssu7g0810 7 16228617 16231721 PCT