Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2855 ATGGGGCAGGCAAATTCAGCGTCCGGAATGGCTGTGCATGATGACTGCAAACTGAAGTTCCAGGAGCTTAAGGCAAAGCGGAGCTACCGATTCATTACATTCAAAATTGAGCAACAAGAAGTTGTGGTCGACAAAATAGGGGGACCAACGGAAAGCTATGACGATTTTCAGGCCAGTTTGCCAGCTGATGAGTGTCGTTATGCCGTCTATGATTTTGATTTCACAACTGATGAGAATTGCCAGAAAAGCAAGATCTTCTTCATTGCATGGTCACCAGACACTTCAAAGGTGAGGATGAAGATGGTGTATGCAAGTTCCAAGGATAGATTCAAGAGGGAACTGGAAGGCATTCAAGTCGAACTGCAAGCAACTGATCCAAGTGAGATGAGCTTGGACATTGTGAAAGCGCGAGCCTTCTAA 420 0.4548 MGQANSASGMAVHDDCKLKFQELKAKRSYRFITFKIEQQEVVVDKIGGPTESYDDFQASLPADECRYAVYDFDFTTDENCQKSKIFFIAWSPDTSKVRMKMVYASSKDRFKRELEGIQVELQATDPSEMSLDIVKARAF 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2855 139 SUPERFAMILY Actin depolymerizing proteins 5 137 - -
Ssu2g2855 139 PANTHER COFILIN-RELATED 3 139 IPR017904 GO:0015629|GO:0030042
Ssu2g2855 139 ProSiteProfiles ADF-H domain profile. 7 139 IPR002108 GO:0003779
Ssu2g2855 139 Pfam Cofilin/tropomyosin-type actin-binding protein 16 136 IPR002108 GO:0003779
Ssu2g2855 139 SMART adf_2 14 139 IPR002108 GO:0003779
Ssu2g2855 139 CDD ADF_cofilin_like 8 138 IPR017904 GO:0015629|GO:0030042
Ssu2g2855 139 Gene3D Severin 1 138 IPR029006 -
Ssu2g2855 139 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 3 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2855 Ssu-Chr2 89662060 89662672 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2855 K05765 - gmx:100785437 259.225
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0782 7 15721974 15722688 Ssu2g2855 2 89662060 89662672 ECH
Ssu2g2855 2 89662060 89662672 Ssu2g2855 2 89662060 89662672 ECH
Ssu2g2855 2 89662060 89662672 Ssu5g3043 5 77870147 77870934 PCT