Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu7g0782 ATGGCTGTTACTGATGAGTGTAAATTAAAGTTCCTGGAGCTAAAGACAAAGAGGAACTACCGTTTCATTGTGTTTAAGATTGAGAACCTCCAAGTGGTAGTGGAGAAACTCGGAAGCCCAGAAGAAACCTATGAGGACTTTACAGCATCTCTGCCTGCCGATGAGTGCCGTTATGCTGTCTTCGATTTTGATTTCACCACTGATGAAAACTGCCAGAAAAGCAAGATTTTCTTCATTGCATGGTCTCCGGATACATCGAAGGTGAGACAGAAGATGGTGTATGCCAGTTCCAAGGACAGATTCAAGAGGGAACTTGATGGCATTCAAGTTGAGTTGCAAGCAACGGATCCTAGTGAGATGAGCTTTGATATCATAAAAGCACGGGCAATATAA 393 0.43 MAVTDECKLKFLELKTKRNYRFIVFKIENLQVVVEKLGSPEETYEDFTASLPADECRYAVFDFDFTTDENCQKSKIFFIAWSPDTSKVRQKMVYASSKDRFKRELDGIQVELQATDPSEMSFDIIKARAI 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu7g0782 130 Pfam Cofilin/tropomyosin-type actin-binding protein 7 127 IPR002108 GO:0003779
Ssu7g0782 130 Gene3D Severin 1 130 IPR029006 -
Ssu7g0782 130 SUPERFAMILY Actin depolymerizing proteins 1 128 - -
Ssu7g0782 130 CDD ADF_cofilin_like 1 129 IPR017904 GO:0015629|GO:0030042
Ssu7g0782 130 PANTHER COFILIN-RELATED 1 130 IPR017904 GO:0015629|GO:0030042
Ssu7g0782 130 PANTHER COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN 1 130 - -
Ssu7g0782 130 SMART adf_2 5 130 IPR002108 GO:0003779
Ssu7g0782 130 ProSiteProfiles ADF-H domain profile. 1 130 IPR002108 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu7g0782 Ssu-Chr7 15721974 15722688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu7g0782 K05765 - csv:116402770 245.743
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu7g0782 7 15721974 15722688 Ssu2g2855 2 89662060 89662672 ECH
Ssu7g0782 7 15721974 15722688 Ssu7g0782 7 15721974 15722688 ECH