Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ssu2g2847 ATGTTTCGTTCTGCAAGATGGAGAAGCGAGAAGAACAGGGTCAAAGCTGTTTTCAAGCTGCACTTCCATGCCTCCCAGGTGTTTCAATCTgggatggatgcattggtgctGTCTATAGTTCCAGGGGACATTGGAAAGCCAACTACAAGATTAGAGAAAGCTACAGTTCGAGATGGAACTTGTAGATGGGAAAATCCGGTGTATGAAACTGTCAAGTTTACTCAGGAGCCTAAGACCGGGAAAATCAgtcataaaatatatcattttttggtttcaacgGGATTACCAAAAGCTAGCTCCATTGGAGAGGTTTCTATAAACTTTGCTGATTATGTGGAGGCCACCAAACCCTCCTCTGTCTCTCTTCCCATCAGGATTTCTCATTGTGATGCTGTTTTGCATGTATCAATCCAGAGGCTGCAAGAAAACGGTGATCGAAGAGAGGAAGATGAATGTGAAGATGCCAAACTAAAATCCGATGATAGGAGCTCAAGGAACCAACTAAGCAACGGTGATACGGATGAAACCAGTAGAAGTTATTCTTCTGAAGATGTCTCTGCCAAAGCAATAATCAATAGAGCTGAACTGAGTTCTAATTATAGGACATCTAGTGCCTCTGATATGACATTGTCAAGCTCTGATGACAGCTCTGGACTTGATACTCCCCGCGAAATTGgaccaagaaaaaagaacatCCACCCCAACATAAAAAGGTTTGTTCCAGACCCAGTCATGCGCCATGCTTCAGAACCTCAGAACCTTGCTCTCAATGCCTCAACATCAATGCATGATGTACATCAGAGATCACACTGGGACTGGTCAGCTGGTTCGGAGCATAGGTTAAGTACAGATGATTCAACATATGGTTCTCATCATAATTCTCTTCCAATGGAAAGCTCCCAACAACCTTCCCCTTTAGAGATTGAAAATCTCAAGGCTGAACTTGCTGCTTTGGCCAGGCAGGTGGATGTGTCAGACTTGGAATTGCAAACCCTTAGGAAACAAATTGTGAAGGAATGCAAAAGAGGGCAGGACCTCACGAAGGAAATCATCGTCTTGAAAGAGGAAAGGGATGCACTCAAGACAGAATGTGACAATCTCAGGTCTTTTCATAAACGCATAGATGAGGCCAAAGGGAGAAACAAGTCACAATTGGAAGGTGGAGATCTTcatgctcttgttgaagaaataAGACAAGAATTGCATTATGAGAAAGACCTAAATGCAAATCTCCGGTTACAGTTAAAGAAGATGCAAGAATCAAATGCTGAACTGGTTCTTGCTGTGCAGGATCTGGATGAAATCCTGGATAAAAATTCCCAAGAGATAAGGCTAAACCTCTCTAAATGTGGAGCAGATGATGATGAAGAACAGAAAGCGTTGGAGGAGCTTGTTAAGGAGCACAGCGAAGCCAATGAGACACACTTACTTGAGAAGAAAATAGTAGACCTCTATGGTGAAATAGAGATGTATAGGAGAGACAAAGATGAGTTAGAGATGCAGATGGAACAGCTTGCACTGGACTATGAGATATTGAAACAGGAAAACCATGGCCTTGCATATAAGCTGGAGCAAAGCCAACTGCAAGAACAGTTGAAAATGCAATATGAATGTTCATCTCCTCCTCCTGCAATGAATGACATTGAAATCCACATCAAGAATCTGGAAGATCAACTCAGGGAACAATCAGAAGACTTCTCAAATTCTCTGGCTACCATTAAGGCACTTGAAAGCCACATCAGAAGATTAGAGGAGGAAATGGAGAAACAAGCACAAGGATTTGAAGCTGATCTAGAAGCAGTGATGCGCGACAAAGTTGAGCAAGAGCAAAGAGCCATCCAAGCAGAGGAAGCTTTGCGAAAGACCAGACTGAAAAATGCTAAAACTGCTGAGAGGCTTCAAGATGAATTCCGAAGGCTCTCCACGCAAATGACCACTACATTTGATGCGAACGAGAAGGCTACCATGAAAGCATTGACAGAAGCAAGTGAGGTGCGCGCACAGAAAAGTTTACTGGAAGAAAAGCTGCATAAAGTCAAAGAAGAACTTGAGTCAACTAAAGGTAATTATGAGGTAAAACTGAACCAACTTTCCAGCCAGATAGATACAATGAAGGTTCAGATACAACAAATGTTGTTGGAAATTGAGGACAAGTCCATGCAGCTTGAAAATCAGAAGAAGCACGGGGAGCAAGTTAGTAGGGTTTTCTCTCATGAGATCGGGTCACTAAAAGCTGAGAATGGAAAGCTTAACGTGGAGATTTCAAGCTTACTTGAGCAAGTAGAAGGAAAGGAAGTTTTAAGAACTGACTTGGAAGTTATGAAAAAATCAGTTCAGGAATCTGAGACACTGTTACAGAAAGGAACTGTGGAAAGAAATGAACTGGTAGGTACAATTGCATTGTTGAAGAAGGAGGCAGACCAGTCACTTATTGAGCTAAATAGGATGAGACATCTTAAGGGTGAAAAAGAAACAGAGGTTAGAGCCTTGCAGTCAGAGTTAGAAGCCATTAGAGCTCAGTACAGTGACCTGAAAGTCTCTCTTTCTGAGGATGAAGCTGAGAAAGAAAAACTACGAAAGCAAGTTTTACAGCTAAAGGGTgaattgaagaagaaagaggatgCTTTAATCAGTGCCGAGAAGAGGTTCAGGGAAAGTAATGGACGCACACAACTTGCCGATGCAACGAAAACTAgtccaaagaataaaaaagctGCTTCAATTCCTCAGAATTCAAAGGAAATAGCCAGTCtgaaggagaaaataaaaacgcTTGAGGCCATGATACAGTCAAAGGAAAGTGCCTTGGAAACTTCAACAACTTCATTTTTGGAGAAGGAAGAGGAACTCCAGACCAAAATTGAGGAGCTGGAGAACAAAGTGGAGGAATTCAACCGGAGTATTGCTTTGCAGAAGGTATACTCATACTTTTACAGTGTAAAGCTAGTGCACTTAATAAACAGTACTGAAACTTTAAGCCATTATAACGTAAACTTGCCAGAGAAAGAAGCGGGAACCTCCACAATCGATACCGCAGATAGCAGTTTTGGTGACATATTAACTGAGCTAACGTCattgaaggaaagaaacaaATCCATGGAAAGCGAACTTAAAGAGATGCAAGAGAGATACTTAGAAATGAGCCTCAATTTTGCTGAGGTAGAAGGTGAAAGACAAAAGCTCGTTATGACTGTACGGAATCTTAAGAGTAACCAGAAAGGCTAA 3225 0.3991 MFRSARWRSEKNRVKAVFKLHFHASQVFQSGMDALVLSIVPGDIGKPTTRLEKATVRDGTCRWENPVYETVKFTQEPKTGKISHKIYHFLVSTGLPKASSIGEVSINFADYVEATKPSSVSLPIRISHCDAVLHVSIQRLQENGDRREEDECEDAKLKSDDRSSRNQLSNGDTDETSRSYSSEDVSAKAIINRAELSSNYRTSSASDMTLSSSDDSSGLDTPREIGPRKKNIHPNIKRFVPDPVMRHASEPQNLALNASTSMHDVHQRSHWDWSAGSEHRLSTDDSTYGSHHNSLPMESSQQPSPLEIENLKAELAALARQVDVSDLELQTLRKQIVKECKRGQDLTKEIIVLKEERDALKTECDNLRSFHKRIDEAKGRNKSQLEGGDLHALVEEIRQELHYEKDLNANLRLQLKKMQESNAELVLAVQDLDEILDKNSQEIRLNLSKCGADDDEEQKALEELVKEHSEANETHLLEKKIVDLYGEIEMYRRDKDELEMQMEQLALDYEILKQENHGLAYKLEQSQLQEQLKMQYECSSPPPAMNDIEIHIKNLEDQLREQSEDFSNSLATIKALESHIRRLEEEMEKQAQGFEADLEAVMRDKVEQEQRAIQAEEALRKTRLKNAKTAERLQDEFRRLSTQMTTTFDANEKATMKALTEASEVRAQKSLLEEKLHKVKEELESTKGNYEVKLNQLSSQIDTMKVQIQQMLLEIEDKSMQLENQKKHGEQVSRVFSHEIGSLKAENGKLNVEISSLLEQVEGKEVLRTDLEVMKKSVQESETLLQKGTVERNELVGTIALLKKEADQSLIELNRMRHLKGEKETEVRALQSELEAIRAQYSDLKVSLSEDEAEKEKLRKQVLQLKGELKKKEDALISAEKRFRESNGRTQLADATKTSPKNKKAASIPQNSKEIASLKEKIKTLEAMIQSKESALETSTTSFLEKEEELQTKIEELENKVEEFNRSIALQKVYSYFYSVKLVHLINSTETLSHYNVNLPEKEAGTSTIDTADSSFGDILTELTSLKERNKSMESELKEMQERYLEMSLNFAEVEGERQKLVMTVRNLKSNQKG 1074
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 143 168 - -
Ssu2g2847 1074 Coils Coil 545 625 - -
Ssu2g2847 1074 PANTHER MYOSIN HEAVY CHAIN-LIKE PROTEIN 6 1074 - -
Ssu2g2847 1074 Coils Coil 343 363 - -
Ssu2g2847 1074 Pfam N-terminal C2 in EEIG1 and EHBP1 proteins 11 146 IPR019448 -
Ssu2g2847 1074 Coils Coil 662 728 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 280 302 - -
Ssu2g2847 1074 Gene3D - 808 976 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 200 219 - -
Ssu2g2847 1074 Coils Coil 908 935 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 169 185 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 276 302 - -
Ssu2g2847 1074 Coils Coil 813 882 - -
Ssu2g2847 1074 Coils Coil 940 967 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 884 910 - -
Ssu2g2847 1074 Coils Coil 454 474 - -
Ssu2g2847 1074 ProSiteProfiles C2 NT-type domain profile. 6 141 IPR019448 -
Ssu2g2847 1074 PANTHER MYOSIN HEAVY CHAIN-RELATED PROTEIN 6 1074 - -
Ssu2g2847 1074 Coils Coil 1023 1057 - -
Ssu2g2847 1074 Coils Coil 308 335 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 200 236 - -
Ssu2g2847 1074 Coils Coil 481 515 - -
Ssu2g2847 1074 Coils Coil 408 428 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 889 910 - -
Ssu2g2847 1074 MobiDBLite consensus disorder prediction 143 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Ssu2g2847 Ssu-Chr2 89532446 89537430 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ssu2g2847 - - gmx:100792602 1733.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Ssu2g2847 2 89532446 89537430 Ssu2g2847 2 89532446 89537430 ECH
Ssu7g0775 7 15636279 15641106 Ssu2g2847 2 89532446 89537430 ECH
Ssu2g2847 2 89532446 89537430 Ssu5g3037 5 77792006 77793486 PCT